RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 RPS6KL1Q9Y6S9 549 aa16.81■□□□□ 0.28
LIMK2-203ENST00000340552 GSTA1P08263 222 aa16.81■□□□□ 0.28
LIMK2-203ENST00000340552 PAPOLAP51003 745 aaKnown RBP16.81■□□□□ 0.28
LIMK2-203ENST00000340552 SPICE1Q8N0Z3 855 aa16.81■□□□□ 0.28
LIMK2-203ENST00000340552 CMTR1Q8N1G2 835 aaKnown RBP16.81■□□□□ 0.28
LIMK2-203ENST00000340552 NOVA2Q9UNW9 492 aaKnown RBP16.81■□□□□ 0.28
LIMK2-203ENST00000340552 GPR75-ASB3A0A0A6YYF3 556 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 WNT7AO00755 349 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 KIF4AO95239 1232 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 DNM2P50570 870 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 BIRC3Q13489 604 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 KLHDC7AQ5VTJ3 777 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 CATIPQ7Z7H3 387 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 ANKRD13CQ8N6S4 541 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 WASF1Q92558 559 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 PRCCQ92733 491 aaPredicted RBP16.8■□□□□ 0.28
LIMK2-203ENST00000340552 CAMKK2Q96RR4 588 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 ZFATQ9P243 1243 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 AGAP1Q9UPQ3 857 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 DLEC1Q9Y238 1755 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 TSPY2A6NKD2 308 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 NMT2O60551 498 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 PYGLP06737 847 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 MYBL1P10243 752 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 ATP4AP20648 1035 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 MKRN4PQ13434 485 aaPredicted RBP16.8■□□□□ 0.28
LIMK2-203ENST00000340552 PPP2R5BQ15173 497 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 GNPTABQ3T906 1256 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 C2CD5Q86YS7 1000 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 MAPKAPK5Q8IW41 473 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 MFN1Q8IWA4 741 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 SLF2Q8IX21 1173 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 CRACR2BQ8N4Y2 399 aaPredicted RBP16.8■□□□□ 0.28
LIMK2-203ENST00000340552 PAPOLBQ9NRJ5 636 aaKnown RBP16.8■□□□□ 0.28
LIMK2-203ENST00000340552 CDK5RAP2Q96SN8 1893 aa16.8■□□□□ 0.28
LIMK2-203ENST00000340552 TRIM75PA6NK02 468 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 GNAT1P11488 350 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 KCNJ2P63252 427 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 FAM133BQ5BKY9 247 aaKnown RBP16.79■□□□□ 0.28
LIMK2-203ENST00000340552 TYW1BQ6NUM6 668 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 ERICH1Q86X53 443 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 ARHGAP20Q9P2F6 1191 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 RAD51CO43502 376 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 EEF1GP26641 437 aaKnown RBP16.79■□□□□ 0.28
LIMK2-203ENST00000340552 ECHS1P30084 290 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 CTNNA1P35221 906 aaKnown RBP16.79■□□□□ 0.28
LIMK2-203ENST00000340552 CTCFP49711 727 aaPredicted RBP16.79■□□□□ 0.28
LIMK2-203ENST00000340552 MAGOHP61326 146 aaKnown RBP16.79■□□□□ 0.28
LIMK2-203ENST00000340552 EARS2Q5JPH6 523 aaKnown RBP16.79■□□□□ 0.28
LIMK2-203ENST00000340552 MDM1Q8TC05 714 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 MAGOHBQ96A72 148 aaKnown RBP16.79■□□□□ 0.28
LIMK2-203ENST00000340552 MTMR8Q96EF0 704 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 DYNLL2Q96FJ2 89 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 CHMP6Q96FZ7 201 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 FAM163AQ96GL9 167 aaPredicted RBP16.79■□□□□ 0.28
LIMK2-203ENST00000340552 STK32BQ9NY57 414 aa16.79■□□□□ 0.28
LIMK2-203ENST00000340552 CFAP73A6NFT4 308 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 DNA2P51530 1060 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 CDK17Q00537 523 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 PDXDC2PQ6P474 469 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 GPIHBP1Q8IV16 184 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 OSBPL1AQ9BXW6 950 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 EXOC1Q9NV70 894 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 H0YIN7 160 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 MAP3K13O43283 966 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 DEXIO95424 95 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 FERP16591 822 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 PLCG2P16885 1265 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 ALDH5A1P51649 535 aaPredicted RBP16.78■□□□□ 0.28
LIMK2-203ENST00000340552 KIF11P52732 1056 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 TROAPQ12815 778 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 HLTFQ14527 1009 aaKnown RBP eCLIP16.78■□□□□ 0.28
LIMK2-203ENST00000340552 DOK7Q18PE1 504 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 EEF2KMTQ96G04 330 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 TSC22D3Q99576 134 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 LRRC4CQ9HCJ2 640 aa16.78■□□□□ 0.28
LIMK2-203ENST00000340552 SAP30BPQ9UHR5 308 aaKnown RBP16.78■□□□□ 0.28
LIMK2-203ENST00000340552 A8MUI8 341 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 BUB1O43683 1085 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 GTPBP6O43824 516 aaPredicted RBP16.77■□□□□ 0.28
LIMK2-203ENST00000340552 RPN1P04843 607 aaKnown RBP16.77■□□□□ 0.28
LIMK2-203ENST00000340552 ERVK-9P63128 1117 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 ANKRD20A2Q5SQ80 823 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 ANKRD20A1Q5TYW2 823 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 AGBL2Q5U5Z8 902 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 ANKRD20A3Q5VUR7 823 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 RUFY4Q6ZNE9 571 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 PCMTD1Q96MG8 357 aaPredicted RBP16.77■□□□□ 0.28
LIMK2-203ENST00000340552 ARHGEF10LQ9HCE6 1279 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 GAKO14976 1311 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 ROBO3Q96MS0 1386 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 DPPA5A6NC42 116 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 SPDYE3A6NKU9 549 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 TTC36A6NLP5 189 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 CALM1P0DP23 149 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 CALM2P0DP24 149 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 CALM3P0DP25 149 aa16.77■□□□□ 0.28
LIMK2-203ENST00000340552 NQO1P15559 274 aaKnown RBP16.77■□□□□ 0.28
LIMK2-203ENST00000340552 CCND1P24385 295 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms