RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 IKQ13123 557 aaPredicted RBP18.02■□□□□ 0.47
LITAF-201ENST00000339430 SUPT20HL1Q3ZLR7 823 aa18.02■□□□□ 0.47
LITAF-201ENST00000339430 KIAA1755Q5JYT7 1200 aa18.02■□□□□ 0.47
LITAF-201ENST00000339430 CACNA2D4Q7Z3S7 1137 aa18.02■□□□□ 0.47
LITAF-201ENST00000339430 NEK11Q8NG66 645 aa18.02■□□□□ 0.47
LITAF-201ENST00000339430 CAGE1Q8TC20 777 aa18.02■□□□□ 0.47
LITAF-201ENST00000339430 ZKSCAN4Q969J2 545 aaPredicted RBP18.02■□□□□ 0.47
LITAF-201ENST00000339430 GMCL1Q96IK5 515 aa18.02■□□□□ 0.47
LITAF-201ENST00000339430 NT5C3AQ9H0P0 336 aa18.02■□□□□ 0.47
LITAF-201ENST00000339430 SYNPO2Q9UMS6 1093 aa18.02■□□□□ 0.47
LITAF-201ENST00000339430 L1RE1Q9UN81 338 aa18.02■□□□□ 0.47
LITAF-201ENST00000339430 CAPN6Q9Y6Q1 641 aa18.02■□□□□ 0.47
LITAF-201ENST00000339430 SSC5DA1L4H1 1573 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 POTEFA5A3E0 1075 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 AKR1B10O60218 316 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 MED24O75448 989 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 POTEIP0CG38 1075 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 KCNMA1Q12791 1236 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 EAPPQ56P03 285 aaPredicted RBP18.01■□□□□ 0.47
LITAF-201ENST00000339430 HERC4Q5GLZ8 1057 aaPredicted RBP18.01■□□□□ 0.47
LITAF-201ENST00000339430 POTEGQ6S5H5 508 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 POTEEQ6S8J3 1075 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 PURBQ96QR8 312 aaKnown RBP18.01■□□□□ 0.47
LITAF-201ENST00000339430 GOPCQ9HD26 462 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 COL4A3BPQ9Y5P4 624 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 MEIS2O14770 477 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 MOCS3O95396 460 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 BMP3P12645 472 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 HNRNPH3P31942 346 aaKnown RBP18.01■□□□□ 0.47
LITAF-201ENST00000339430 FKBP3Q00688 224 aaKnown RBP18.01■□□□□ 0.47
LITAF-201ENST00000339430 ZCWPW2Q504Y3 356 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 PRR16Q569H4 304 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 BAP1Q92560 729 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 TAF1DQ9H5J8 278 aaPredicted RBP18.01■□□□□ 0.47
LITAF-201ENST00000339430 KCNMB3Q9NPA1 279 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 ZNF112Q9UJU3 913 aa18.01■□□□□ 0.47
LITAF-201ENST00000339430 ABCB11O95342 1321 aa18■□□□□ 0.47
LITAF-201ENST00000339430 IQCA1LA6NCM1 817 aa18■□□□□ 0.47
LITAF-201ENST00000339430 PDE2AO00408 941 aaPredicted RBP18■□□□□ 0.47
LITAF-201ENST00000339430 MEIS1O00470 390 aa18■□□□□ 0.47
LITAF-201ENST00000339430 KRT18P05783 430 aaKnown RBP18■□□□□ 0.47
LITAF-201ENST00000339430 APBA1Q02410 837 aa18■□□□□ 0.47
LITAF-201ENST00000339430 HYIQ5T013 277 aa18■□□□□ 0.47
LITAF-201ENST00000339430 CCDC65Q8IXS2 484 aa18■□□□□ 0.47
LITAF-201ENST00000339430 CRACR2AQ9BSW2 395 aa18■□□□□ 0.47
LITAF-201ENST00000339430 SH2D4AQ9H788 454 aa18■□□□□ 0.47
LITAF-201ENST00000339430 USO1O60763 962 aaKnown RBP17.99■□□□□ 0.47
LITAF-201ENST00000339430 N4BP1O75113 896 aaKnown RBP17.99■□□□□ 0.47
LITAF-201ENST00000339430 ZMYND10O75800 440 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 CYP11B2P19099 503 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 CYP2C19P33261 490 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 USP14P54578 494 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 ANKRD13CQ8N6S4 541 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 IQCDQ96DY2 449 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 VCPKMTQ9H867 229 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.99■□□□□ 0.47
LITAF-201ENST00000339430 ARHGAP4P98171 946 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 GFPT1Q06210 699 aaPredicted RBP17.99■□□□□ 0.47
LITAF-201ENST00000339430 CASP8Q14790 479 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 SCYL3Q8IZE3 742 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 ZC3H15Q8WU90 426 aaKnown RBP17.99■□□□□ 0.47
LITAF-201ENST00000339430 KLRG1Q96E93 195 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 TSGA10Q9BZW7 698 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 SMCHD1A6NHR9 2005 aa17.99■□□□□ 0.47
LITAF-201ENST00000339430 USP11P51784 963 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 PSMC6P62333 389 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 C2orf54Q08AI8 447 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 TDRD12Q587J7 1177 aaKnown RBP17.98■□□□□ 0.47
LITAF-201ENST00000339430 ARSHQ5FYA8 562 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 PDXDC1Q6P996 788 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 SCFD1Q8WVM8 642 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 PSMB7Q99436 277 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 NAP1L4Q99733 375 aaKnown RBP17.98■□□□□ 0.47
LITAF-201ENST00000339430 HINFPQ9BQA5 517 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 GINM1Q9NU53 330 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 PCDHA2Q9Y5H9 948 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 SCN4AP35499 1836 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 CKAP4Q07065 602 aaKnown RBP17.98■□□□□ 0.47
LITAF-201ENST00000339430 FAM83BQ5T0W9 1011 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 LSM14BQ9BX40 385 aaKnown RBP17.98■□□□□ 0.47
LITAF-201ENST00000339430 GBP3Q9H0R5 595 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 EMILIN3Q9NT22 766 aa17.98■□□□□ 0.47
LITAF-201ENST00000339430 ANO9A1A5B4 782 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 TACC1O75410 805 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 MAGEA1P43355 309 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 WDR93Q6P2C0 686 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 CATSPER3Q86XQ3 398 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 GLT8D2Q9H1C3 349 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 POLD4Q9HCU8 107 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 PICK1Q9NRD5 415 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 LRRIQ3A6PVS8 624 aaPredicted RBP17.97■□□□□ 0.47
LITAF-201ENST00000339430 USP2O75604 605 aaPredicted RBP17.97■□□□□ 0.47
LITAF-201ENST00000339430 HOXA13P31271 388 aaPredicted RBP17.97■□□□□ 0.47
LITAF-201ENST00000339430 CASP5P51878 434 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 SLC12A3P55017 1021 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 PABPC4Q13310 644 aaKnown RBP eCLIP17.97■□□□□ 0.478e-7■■■■■ 44.2
LITAF-201ENST00000339430 TRIM58Q8NG06 486 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 AMNQ9BXJ7 453 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 SALL4Q9UJQ4 1053 aa17.97■□□□□ 0.47
LITAF-201ENST00000339430 DOCK1Q14185 1865 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms