RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 UGCGQ16739 394 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 UTP14CQ5TAP6 766 aaKnown RBP8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 C1orf186Q6ZWK4 172 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 CCDC112Q8NEF3 446 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 PANX2Q96RD6 677 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 CRACR2AQ9BSW2 395 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 ELP3Q9H9T3 547 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 AGO4Q9HCK5 861 aaKnown RBP8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 KCND1Q9NSA2 647 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 FAM207AQ9NSI2 230 aaPredicted RBP8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 SAMM50Q9Y512 469 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 UBIAD1Q9Y5Z9 338 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 V9GYY5 206 aaPredicted RBP8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 CLIC2O15247 247 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 CCNE2O96020 404 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 POTEJP0CG39 1038 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 SUPT20HL1Q3ZLR7 823 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 ARHGEF16Q5VV41 709 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 PCNX4Q63HM2 1172 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 MCF2L2Q86YR7 1114 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 NDST4Q9H3R1 872 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 AS3MTQ9HBK9 375 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 ADARB2Q9NS39 739 aaKnown RBP8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 DNAI1Q9UI46 699 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 ADAMTS5Q9UNA0 930 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 RLFQ13129 1914 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 ITIH6Q6UXX5 1313 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 COL11A1P12107 1806 aaPredicted RBP8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 PLEKP08567 350 aaPredicted RBP8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 TRIM21P19474 475 aaKnown RBP8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 CASP4P49662 377 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 DNM2P50570 870 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 CNTN2Q02246 1040 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 SEMA3FQ13275 785 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 VWA3BQ502W6 1294 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 SULF1Q8IWU6 871 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 DCPSQ96C86 337 aaKnown RBP8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 OTUD5Q96G74 571 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 PRIMPOLQ96LW4 560 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 PCMTD1Q96MG8 357 aaPredicted RBP8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 TEKT3Q9BXF9 490 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 TTYH3Q9C0H2 523 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 LRRC27Q9C0I9 530 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 A1CFQ9NQ94 594 aaKnown RBP8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 JADE2Q9NQC1 790 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 ADGRG1Q9Y653 693 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 ASTN1O14525 1302 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 GCNT3O95395 438 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 TFRCP02786 760 aaKnown RBP8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 NR3C2P08235 984 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 SOX10P56693 466 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 MAP3K9P80192 1104 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 FKBP3Q00688 224 aaKnown RBP8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 LRRC63Q05C16 580 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 KCNMA1Q12791 1236 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 ADAM9Q13443 819 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 MIER3Q7Z3K6 550 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 CNGA4Q8IV77 575 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 DAW1Q8N136 415 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 MYCT1Q8N699 235 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 FIZ1Q96SL8 496 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 BTBD7Q9P203 1132 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 TRIM10Q9UDY6 481 aa8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 LUC7L2Q9Y383 392 aaKnown RBP8.19□□□□□ -1.1
SRFBP1-201ENST00000339397 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.19□□□□□ -1.14e-6■■□□□ 12.6
SRFBP1-201ENST00000339397 PITPNM2Q9BZ72 1349 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 TISP43B9A030 160 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 C19orf81C9J6K1 198 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 RBAK-RBAKDNI3L0D1 243 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 NRDCO43847 1150 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 KCNJ6P48051 423 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 NPEPPSP55786 919 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 ETF1P62495 437 aaKnown RBP8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 EPHA7Q15375 998 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 EPM2AIP1Q7L775 607 aaPredicted RBP8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 C12orf42Q96LP6 360 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 MMRN2Q9H8L6 949 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 TUFT1Q9NNX1 390 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 GPRC5CQ9NQ84 441 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 GINM1Q9NU53 330 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 TMOD4Q9NZQ9 345 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 CAPN11Q9UMQ6 739 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 SIK3Q9Y2K2 1263 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 REXO2Q9Y3B8 237 aaKnown RBP8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 PHIPQ8WWQ0 1821 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 DOCK1Q14185 1865 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 TGFB1I1O43294 461 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 NR2F2P24468 414 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 SETQ01105 290 aaPredicted RBP8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 SP2Q02086 613 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 GHRHRQ02643 423 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 KNOP1Q1ED39 458 aaKnown RBP8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 EAPPQ56P03 285 aaPredicted RBP8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 PLA2G4FQ68DD2 849 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 VSIG10LQ86VR7 867 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 ZNF710Q8N1W2 664 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 OR8K1Q8NGG5 319 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 NOC3LQ8WTT2 800 aaKnown RBP8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 RIT2Q99578 217 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms