RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 SLF1Q9BQI6 1058 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 ASCC2Q9H1I8 757 aaPredicted RBP12.29□□□□□ -0.44
LRP1-202ENST00000338962 VAV3Q9UKW4 847 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 CCPG1Q9ULG6 757 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 SMCHD1A6NHR9 2005 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 ICAM1P05362 532 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 OSBPP22059 807 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 DSG3P32926 999 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 KRT9P35527 623 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 DESI2Q9BSY9 194 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 NOC4LQ9BVI4 516 aaKnown RBP12.29□□□□□ -0.44
LRP1-202ENST00000338962 CFHR5Q9BXR6 569 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 PPP1R9AQ9ULJ8 1098 aa12.29□□□□□ -0.44
LRP1-202ENST00000338962 CTIFO43310 598 aaKnown RBP12.28□□□□□ -0.44
LRP1-202ENST00000338962 CYP11B2P19099 503 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 SLC12A3P55017 1021 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 MTF1Q14872 753 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 LRRC41Q15345 812 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 TMTC1Q8IUR5 882 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 TSC1Q92574 1164 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 TANGO6Q9C0B7 1094 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 PHLPP2Q6ZVD8 1323 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 MEIS1O00470 390 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 FLOT1O75955 427 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 KIF20AO95235 890 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 SPATA31C1P0DKV0 1188 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 FDX1P10109 184 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 TRIM21P19474 475 aaKnown RBP12.28□□□□□ -0.44
LRP1-202ENST00000338962 UBXN2AP68543 259 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 CYP4A11Q02928 519 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 RAD51AP2Q09MP3 1159 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 TBC1D8BQ0IIM8 1120 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 CEP55Q53EZ4 464 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 HERC4Q5GLZ8 1057 aaPredicted RBP12.28□□□□□ -0.44
LRP1-202ENST00000338962 FKBP15Q5T1M5 1219 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 LRCH2Q5VUJ6 765 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 FOXR2Q6PJQ5 311 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 GLIS3Q8NEA6 775 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 GTF3C2Q8WUA4 911 aaPredicted RBP12.28□□□□□ -0.44
LRP1-202ENST00000338962 AGBL1Q96MI9 1066 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 ZHX3Q9H4I2 956 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 DNAI1Q9UI46 699 aa12.28□□□□□ -0.44
LRP1-202ENST00000338962 LUC7L2Q9Y383 392 aaKnown RBP12.28□□□□□ -0.44
LRP1-202ENST00000338962 TTC26A0AVF1 554 aa12.27□□□□□ -0.45
LRP1-202ENST00000338962 SPDYE16A6NNV3 312 aaPredicted RBP12.27□□□□□ -0.45
LRP1-202ENST00000338962 CA12O43570 354 aa12.27□□□□□ -0.45
LRP1-202ENST00000338962 FECHP22830 423 aa12.27□□□□□ -0.45
LRP1-202ENST00000338962 HERVK_113P62684 666 aa12.27□□□□□ -0.45
LRP1-202ENST00000338962 IRX3P78415 501 aaPredicted RBP12.27□□□□□ -0.45
LRP1-202ENST00000338962 SETQ01105 290 aaPredicted RBP12.27□□□□□ -0.45
LRP1-202ENST00000338962 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
LRP1-202ENST00000338962 SYCP1Q15431 976 aa12.27□□□□□ -0.45
LRP1-202ENST00000338962 TSR1Q2NL82 804 aaKnown RBP12.27□□□□□ -0.45
LRP1-202ENST00000338962 CYP26C1Q6V0L0 522 aa12.27□□□□□ -0.45
LRP1-202ENST00000338962 RAD9BQ6WBX8 426 aa12.27□□□□□ -0.45
LRP1-202ENST00000338962 KCTD17Q8N5Z5 321 aa12.27□□□□□ -0.45
LRP1-202ENST00000338962 SYT2Q8N9I0 419 aaPredicted RBP12.27□□□□□ -0.45
LRP1-202ENST00000338962 PARK7Q99497 189 aaKnown RBP12.27□□□□□ -0.45
LRP1-202ENST00000338962 EIF2AK1Q9BQI3 630 aaKnown RBP12.27□□□□□ -0.45
LRP1-202ENST00000338962 TBC1D7Q9P0N9 293 aa12.27□□□□□ -0.45
LRP1-202ENST00000338962 NPHP3-ACAD11A0A0J9YXS1 232 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 GAS7O60861 476 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 CYP2C8P10632 490 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 PSMC6P62333 389 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 TRIM65Q6PJ69 517 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 OTOP1Q7RTM1 612 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 RETREG2Q8NC44 543 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 PCMTD1Q96MG8 357 aaPredicted RBP12.26□□□□□ -0.45
LRP1-202ENST00000338962 POLR3CQ9BUI4 534 aaPredicted RBP12.26□□□□□ -0.45
LRP1-202ENST00000338962 NUP58Q9BVL2 599 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 RABGAP1Q9Y3P9 1069 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 ZNF536O15090 1300 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 LOC285556D6RIA3 1793 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 FRMD3A2A2Y4 597 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 RNF225M0QZC1 329 aaPredicted RBP12.26□□□□□ -0.45
LRP1-202ENST00000338962 VWA5AO00534 786 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 CHMP2AO43633 222 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 PTPRFP10586 1907 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 GCLCP48506 637 aaPredicted RBP12.26□□□□□ -0.45
LRP1-202ENST00000338962 HSD17B4P51659 736 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 FKBP3Q00688 224 aaKnown RBP12.26□□□□□ -0.45
LRP1-202ENST00000338962 MAP2K1Q02750 393 aaPredicted RBP12.26□□□□□ -0.45
LRP1-202ENST00000338962 DMTNQ08495 405 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 PPP2R5CQ13362 524 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 ARSHQ5FYA8 562 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 MIIPQ5JXC2 388 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 MCF2L2Q86YR7 1114 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 CPXCR1Q8N123 301 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 REPS2Q8NFH8 660 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 OR8K1Q8NGG5 319 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 BBXQ8WY36 941 aaPredicted RBP12.26□□□□□ -0.45
LRP1-202ENST00000338962 SLC5A5Q92911 643 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 ADGRA2Q96PE1 1338 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 ZNF577Q9BSK1 485 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 BHMT2Q9H2M3 363 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 SLC38A10Q9HBR0 1119 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 CAPN11Q9UMQ6 739 aa12.26□□□□□ -0.45
LRP1-202ENST00000338962 CTDP1Q9Y5B0 961 aaPredicted RBP12.26□□□□□ -0.45
LRP1-202ENST00000338962 ADGRG1Q9Y653 693 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms