RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 USP18Q9UMW8 372 aa18.18■□□□□ 0.5
TSPO-202ENST00000337554 SPTLC1O15269 473 aa18.17■□□□□ 0.5
TSPO-202ENST00000337554 CFHP08603 1231 aa18.17■□□□□ 0.5
TSPO-202ENST00000337554 STXBP2Q15833 593 aa18.17■□□□□ 0.5
TSPO-202ENST00000337554 CELF3Q5SZQ8 465 aaKnown RBP18.17■□□□□ 0.5
TSPO-202ENST00000337554 RGS22Q8NE09 1264 aa18.17■□□□□ 0.5
TSPO-202ENST00000337554 SPATA33Q96N06 139 aa18.17■□□□□ 0.5
TSPO-202ENST00000337554 TCF25Q9BQ70 676 aa18.17■□□□□ 0.5
TSPO-202ENST00000337554 DBR1Q9UK59 544 aaKnown RBP18.17■□□□□ 0.5
TSPO-202ENST00000337554 PCDHB12Q9Y5F1 795 aa18.17■□□□□ 0.5
TSPO-202ENST00000337554 MRVI1Q9Y6F6 885 aa18.17■□□□□ 0.5
TSPO-202ENST00000337554 DENND4AQ7Z401 1863 aa18.17■□□□□ 0.5
TSPO-202ENST00000337554 RARSP54136 660 aaKnown RBP18.16■□□□□ 0.5
TSPO-202ENST00000337554 SP2Q02086 613 aa18.16■□□□□ 0.5
TSPO-202ENST00000337554 FBXO47Q5MNV8 452 aa18.16■□□□□ 0.5
TSPO-202ENST00000337554 RARS2Q5T160 578 aaKnown RBP18.16■□□□□ 0.5
TSPO-202ENST00000337554 SYTL5Q8TDW5 730 aaPredicted RBP18.16■□□□□ 0.5
TSPO-202ENST00000337554 SMG5Q9UPR3 1016 aaKnown RBP18.16■□□□□ 0.5
TSPO-202ENST00000337554 MTMR7Q9Y216 660 aa18.16■□□□□ 0.5
TSPO-202ENST00000337554 LZTS1Q9Y250 596 aa18.16■□□□□ 0.5
TSPO-202ENST00000337554 NBEAQ8NFP9 2946 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 NMT2O60551 498 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 LGALS2P05162 132 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 ZNF528Q3MIS6 628 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 N4BP2L1Q5TBK1 243 aaPredicted RBP18.15■□□□□ 0.5
TSPO-202ENST00000337554 LRSAM1Q6UWE0 723 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 RUFY4Q6ZNE9 571 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 NSUN6Q8TEA1 469 aaKnown RBP18.15■□□□□ 0.5
TSPO-202ENST00000337554 BORCS6Q96GS4 357 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 IWS1Q96ST2 819 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 EPC1Q9H2F5 836 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 C1orf115Q9H7X2 142 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 IL1RAPL2Q9NP60 686 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 SIT1Q9Y3P8 196 aa18.15■□□□□ 0.5
TSPO-202ENST00000337554 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.15■□□□□ 0.5
TSPO-202ENST00000337554 WDFY3Q8IZQ1 3526 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 SMG1Q96Q15 3661 aaKnown RBP18.14■□□□□ 0.49
TSPO-202ENST00000337554 EIF3JO75822 258 aaKnown RBP18.14■□□□□ 0.49
TSPO-202ENST00000337554 TRIM27P14373 513 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 NOVP48745 357 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 CCDC96Q2M329 555 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 PHLDB3Q6NSJ2 640 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 TSHZ1Q6ZSZ6 1077 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 THNSL1Q8IYQ7 743 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 COLGALT1Q8NBJ5 622 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 ZBTB44Q8NCP5 570 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 NETO1Q8TDF5 533 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 DCAF4Q8WV16 495 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 LMBR1Q8WVP7 490 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 MRPS27Q92552 414 aaKnown RBP18.14■□□□□ 0.49
TSPO-202ENST00000337554 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.14■□□□□ 0.49
TSPO-202ENST00000337554 BCAS3Q9H6U6 928 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 ZNF287Q9HBT7 754 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 CA14Q9ULX7 337 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 STX8Q9UNK0 236 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 WDR19Q8NEZ3 1342 aa18.14■□□□□ 0.49
TSPO-202ENST00000337554 LILRB5O75023 590 aa18.13■□□□□ 0.49
TSPO-202ENST00000337554 LRRN2O75325 713 aa18.13■□□□□ 0.49
TSPO-202ENST00000337554 GGPS1O95749 300 aa18.13■□□□□ 0.49
TSPO-202ENST00000337554 CD52P31358 61 aa18.13■□□□□ 0.49
TSPO-202ENST00000337554 PLCB3Q01970 1234 aa18.13■□□□□ 0.49
TSPO-202ENST00000337554 ATAT1Q5SQI0 421 aa18.13■□□□□ 0.49
TSPO-202ENST00000337554 XRRA1Q6P2D8 792 aa18.13■□□□□ 0.49
TSPO-202ENST00000337554 NGRNQ9NPE2 291 aaKnown RBP18.13■□□□□ 0.49
TSPO-202ENST00000337554 EXOC6BQ9Y2D4 811 aa18.13■□□□□ 0.49
TSPO-202ENST00000337554 C1QTNF9BB2RNN3 333 aa18.12■□□□□ 0.49
TSPO-202ENST00000337554 CLASP2O75122 1294 aaKnown RBP18.12■□□□□ 0.49
TSPO-202ENST00000337554 C1QTNF9P0C862 333 aa18.12■□□□□ 0.49
TSPO-202ENST00000337554 TRMT2AQ8IZ69 625 aaKnown RBP18.12■□□□□ 0.49
TSPO-202ENST00000337554 RSAD2Q8WXG1 361 aa18.12■□□□□ 0.49
TSPO-202ENST00000337554 NELL1Q92832 810 aa18.12■□□□□ 0.49
TSPO-202ENST00000337554 SECISBP2LQ93073 1101 aaKnown RBP18.12■□□□□ 0.49
TSPO-202ENST00000337554 RMDN3Q96TC7 470 aa18.12■□□□□ 0.49
TSPO-202ENST00000337554 BOLA2Q9H3K6 86 aa18.12■□□□□ 0.49
TSPO-202ENST00000337554 CWH43Q9H720 699 aa18.12■□□□□ 0.49
TSPO-202ENST00000337554 ENTPD7Q9NQZ7 604 aa18.12■□□□□ 0.49
TSPO-202ENST00000337554 PCDHGA2Q9Y5H1 932 aa18.12■□□□□ 0.49
TSPO-202ENST00000337554 FRMPD2Q68DX3 1309 aaPredicted RBP18.12■□□□□ 0.49
TSPO-202ENST00000337554 FNDC1Q4ZHG4 1894 aaPredicted RBP18.12■□□□□ 0.49
TSPO-202ENST00000337554 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.11■□□□□ 0.49
TSPO-202ENST00000337554 STAG3L1P0CL83 205 aa18.11■□□□□ 0.49
TSPO-202ENST00000337554 GNAT1P11488 350 aa18.11■□□□□ 0.49
TSPO-202ENST00000337554 SCG2P13521 617 aa18.11■□□□□ 0.49
TSPO-202ENST00000337554 ARHGAP4P98171 946 aa18.11■□□□□ 0.49
TSPO-202ENST00000337554 KDF1Q8NAX2 398 aaPredicted RBP18.11■□□□□ 0.49
TSPO-202ENST00000337554 GPCPD1Q9NPB8 672 aa18.11■□□□□ 0.49
TSPO-202ENST00000337554 TYW1Q9NV66 732 aaKnown RBP18.11■□□□□ 0.49
TSPO-202ENST00000337554 CNOT1A5YKK6 2376 aaKnown RBP18.11■□□□□ 0.49
TSPO-202ENST00000337554 IGF2RP11717 2491 aa18.1■□□□□ 0.49
TSPO-202ENST00000337554 C2orf71A6NGG8 1288 aa18.1■□□□□ 0.49
TSPO-202ENST00000337554 N4BP1O75113 896 aaKnown RBP18.1■□□□□ 0.49
TSPO-202ENST00000337554 NR3C2P08235 984 aa18.1■□□□□ 0.49
TSPO-202ENST00000337554 EIF2AK2P19525 551 aaKnown RBP18.1■□□□□ 0.49
TSPO-202ENST00000337554 UBA1P22314 1058 aaKnown RBP18.1■□□□□ 0.49
TSPO-202ENST00000337554 SPOUT1Q5T280 376 aaKnown RBP18.1■□□□□ 0.49
TSPO-202ENST00000337554 MRPL43Q8N983 215 aaKnown RBP18.1■□□□□ 0.49
TSPO-202ENST00000337554 GPKOWQ92917 476 aaPredicted RBP eCLIP18.1■□□□□ 0.49
TSPO-202ENST00000337554 ACSF2Q96CM8 615 aaPredicted RBP18.1■□□□□ 0.49
TSPO-202ENST00000337554 FOXQ1Q9C009 403 aa18.1■□□□□ 0.49
TSPO-202ENST00000337554 IGSF9Q9P2J2 1179 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms