RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 GDAQ9Y2T3 454 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 MROH7-TTC4A0A0A0MT08 1334 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 EME2A4GXA9 379 aaPredicted RBP17.37■□□□□ 0.37
NPHP3-201ENST00000337331 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 ERFEQ4G0M1 354 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 ODR4Q5SWX8 454 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 NAF1Q96HR8 494 aaKnown RBP17.37■□□□□ 0.37
NPHP3-201ENST00000337331 VPS37BQ9H9H4 285 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 DIP2BQ9P265 1576 aa17.37■□□□□ 0.37
NPHP3-201ENST00000337331 K7ENM7 598 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 KRT19P08727 400 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 PLTPP55058 493 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 RASA3Q14644 834 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 GPATCH4Q5T3I0 446 aaKnown RBP17.36■□□□□ 0.37
NPHP3-201ENST00000337331 TRPM8Q7Z2W7 1104 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 TRIM74Q86UV6 250 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 TRIM73Q86UV7 250 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 SCYL3Q8IZE3 742 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 KLHL23Q8NBE8 558 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 FBXO41Q8TF61 875 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 RBM12Q9NTZ6 932 aaKnown RBP17.36■□□□□ 0.37
NPHP3-201ENST00000337331 PPIP5K2O43314 1243 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 PLCG1P19174 1290 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 SERPINB4P48594 390 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 PDE6CP51160 858 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 MRPS35P82673 323 aaKnown RBP17.36■□□□□ 0.37
NPHP3-201ENST00000337331 OTUD6AQ7L8S5 288 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 PROCA1Q8NCQ7 364 aaPredicted RBP17.36■□□□□ 0.37
NPHP3-201ENST00000337331 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.36■□□□□ 0.37
NPHP3-201ENST00000337331 AMNQ9BXJ7 453 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 TMOD4Q9NZQ9 345 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 LGR5O75473 907 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 SLC16A2P36021 539 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 PRKG1Q13976 671 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 CCDC14Q49A88 953 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 MB21D1Q8N884 522 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 GBP7Q8N8V2 638 aaPredicted RBP17.36■□□□□ 0.37
NPHP3-201ENST00000337331 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.36■□□□□ 0.37
NPHP3-201ENST00000337331 RABGAP1Q9Y3P9 1069 aa17.36■□□□□ 0.37
NPHP3-201ENST00000337331 INO80Q9ULG1 1556 aaPredicted RBP17.36■□□□□ 0.37
NPHP3-201ENST00000337331 CTDNEP1O95476 244 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 CHGBP05060 677 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 RCN2Q14257 317 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 LRRC14Q15048 493 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 TTMPQ5BVD1 217 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 XKR9Q5GH70 373 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.35■□□□□ 0.37
NPHP3-201ENST00000337331 TSEN2Q8NCE0 465 aaKnown RBP17.35■□□□□ 0.37
NPHP3-201ENST00000337331 MAIP1Q8WWC4 291 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 FBXL5Q9UKA1 691 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 FAF1Q9UNN5 650 aaPredicted RBP17.35■□□□□ 0.37
NPHP3-201ENST00000337331 DUSP10Q9Y6W6 482 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 DIP2CQ9Y2E4 1556 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 ANKARQ7Z5J8 1434 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 CLTCL1P53675 1640 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 KLHL33A6NCF5 533 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 ERVV-1B6SEH8 477 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 ABL1P00519 1130 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 KIF11P52732 1056 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 FAM102BQ5T8I3 360 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 SUSD4Q5VX71 490 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 SPICE1Q8N0Z3 855 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 ITFG2Q969R8 447 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 USP17L3A6NCW0 530 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 USP17L4A6NCW7 530 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 POLR2MP0CAP2 368 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 DLATP10515 647 aaKnown RBP17.35■□□□□ 0.37
NPHP3-201ENST00000337331 CYB5R4Q7L1T6 521 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 USP17L1Q7RTZ2 530 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 SNRNP27Q8WVK2 155 aaKnown RBP17.35■□□□□ 0.37
NPHP3-201ENST00000337331 RAPGEF5Q92565 580 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 RIC8AQ9NPQ8 531 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 LEMD3Q9Y2U8 911 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 FOSP01100 380 aaPredicted RBP17.35■□□□□ 0.37
NPHP3-201ENST00000337331 ELF3P78545 371 aaPredicted RBP17.35■□□□□ 0.37
NPHP3-201ENST00000337331 MAP7D1Q3KQU3 841 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 ASPRV1Q53RT3 343 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 MYLK4Q86YV6 388 aaPredicted RBP17.35■□□□□ 0.37
NPHP3-201ENST00000337331 MFN1Q8IWA4 741 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 VTI1AQ96AJ9 217 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 FAXDC2Q96IV6 333 aa17.35■□□□□ 0.37
NPHP3-201ENST00000337331 XDHP47989 1333 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 NDC80O14777 642 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 SH3BGRP55822 239 aaPredicted RBP17.34■□□□□ 0.37
NPHP3-201ENST00000337331 USP4Q13107 963 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 KCTD1Q719H9 257 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 YTHDF3Q7Z739 585 aaKnown RBP17.34■□□□□ 0.37
NPHP3-201ENST00000337331 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 ADCY8P40145 1251 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 SKOR1P84550 965 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 STOX1Q6ZVD7 989 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 CEP70Q8NHQ1 597 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 LRRC8CQ8TDW0 803 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
NPHP3-201ENST00000337331 USP21Q9UK80 565 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 PACSIN2Q9UNF0 486 aaPredicted RBP17.34■□□□□ 0.37
NPHP3-201ENST00000337331 SALL3Q9BXA9 1300 aa17.34■□□□□ 0.37
NPHP3-201ENST00000337331 KIDINS220Q9ULH0 1771 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms