RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SIX6OS1Q8N1H7 587 aa14.07□□□□□ -0.16
HLCS-201ENST00000336648 AKT3Q9Y243 479 aa14.07□□□□□ -0.16
HLCS-201ENST00000336648 BASP1P80723 227 aaKnown RBP14.07□□□□□ -0.16
HLCS-201ENST00000336648 TTC19Q6DKK2 380 aaPredicted RBP14.07□□□□□ -0.16
HLCS-201ENST00000336648 TRIM55Q9BYV6 548 aa14.07□□□□□ -0.16
HLCS-201ENST00000336648 PCDHA13Q9Y5I0 950 aa14.07□□□□□ -0.16
HLCS-201ENST00000336648 AATKQ6ZMQ8 1374 aa14.07□□□□□ -0.16
HLCS-201ENST00000336648 TMEM247A6NEH6 219 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 ARHGDIAP52565 204 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 CYP4F22Q6NT55 531 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 PYCARDQ9ULZ3 195 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 INO80B-WBP1J3KQ70 363 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 NPR1P16066 1061 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 CC2D2BQ6DHV5 1058 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 CEP170P1Q96L14 293 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 INO80BQ9C086 356 aaPredicted RBP14.06□□□□□ -0.16
HLCS-201ENST00000336648 SUCLA2Q9P2R7 463 aaPredicted RBP14.06□□□□□ -0.16
HLCS-201ENST00000336648 SYNJ2BP-COX16A0A087WUM0 186 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 BBOX1O75936 387 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 NDUFA10O95299 355 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 ZSCAN20P17040 1043 aaPredicted RBP14.06□□□□□ -0.16
HLCS-201ENST00000336648 CIITAP33076 1130 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 LIFRP42702 1097 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 SEMA3FQ13275 785 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 FSCBQ5H9T9 825 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 COX16Q9P0S2 106 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 PLEKHG1Q9ULL1 1385 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 MLH3Q9UHC1 1453 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 TOM1L1O75674 476 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 BMP3P12645 472 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 DEPDC1BQ8WUY9 529 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 NOP53Q9NZM5 478 aaKnown RBP14.06□□□□□ -0.16
HLCS-201ENST00000336648 PEG3Q9GZU2 1588 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 DNMT1P26358 1616 aaKnown RBP14.06□□□□□ -0.16
HLCS-201ENST00000336648 ABCC2Q92887 1545 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 A0A1B0GW55 424 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 DUX4L2P0CJ85 424 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 DUX4L3P0CJ86 424 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 DUX4L4P0CJ87 422 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 DUX4L5P0CJ88 424 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 DUX4L6P0CJ89 424 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 DUX4L7P0CJ90 424 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 ANXA13P27216 316 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 PAPOLAP51003 745 aaKnown RBP14.06□□□□□ -0.16
HLCS-201ENST00000336648 DPP9Q86TI2 863 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 MYLK4Q86YV6 388 aaPredicted RBP14.06□□□□□ -0.16
HLCS-201ENST00000336648 CRLF3Q8IUI8 442 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 KIAA2013Q8IYS2 634 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 SPDYE1Q8NFV5 336 aaPredicted RBP14.06□□□□□ -0.16
HLCS-201ENST00000336648 TBCKQ8TEA7 893 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 ORAI2Q96SN7 254 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 TRAIPQ9BWF2 469 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 KIAA1586Q9HCI6 787 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 DUX4Q9UBX2 424 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 KIAA0556O60303 1618 aa14.06□□□□□ -0.16
HLCS-201ENST00000336648 ZBED1O96006 694 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 ADD2P35612 726 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 NBPF9Q3BBW0 867 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 KIAA0825Q8IV33 1275 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 RBM41Q96IZ5 413 aaKnown RBP14.05□□□□□ -0.16
HLCS-201ENST00000336648 SUN2Q9UH99 717 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 LRFN2Q9ULH4 789 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 PZPP20742 1482 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 ENC1O14682 589 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 TJP3O95049 919 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 EIF4A3P38919 411 aaKnown RBP14.05□□□□□ -0.16
HLCS-201ENST00000336648 LRRC24Q50LG9 513 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 UBE2TQ9NPD8 197 aaPredicted RBP14.05□□□□□ -0.16
HLCS-201ENST00000336648 USP21Q9UK80 565 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 APBA3O96018 575 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 ORC2Q13416 577 aaPredicted RBP14.05□□□□□ -0.16
HLCS-201ENST00000336648 TSTA3Q13630 321 aaPredicted RBP14.05□□□□□ -0.16
HLCS-201ENST00000336648 PTPROQ16827 1216 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 TRMT10CQ7L0Y3 403 aaKnown RBP14.05□□□□□ -0.16
HLCS-201ENST00000336648 WDR75Q8IWA0 830 aaKnown RBP14.05□□□□□ -0.16
HLCS-201ENST00000336648 IL17REQ8NFR9 667 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 PYROXD1Q8WU10 500 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 SCG3Q8WXD2 468 aaKnown RBP14.05□□□□□ -0.16
HLCS-201ENST00000336648 KLC2Q9H0B6 622 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 TRPC5Q9UL62 973 aaPredicted RBP14.05□□□□□ -0.16
HLCS-201ENST00000336648 WDR62O43379 1518 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 SH2B2O14492 632 aaPredicted RBP14.05□□□□□ -0.16
HLCS-201ENST00000336648 DPCR1Q3MIW9 517 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 FAM133AQ8N9E0 248 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 TMEM60Q9H2L4 133 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 UBN1Q9NPG3 1134 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 SYNGAP1Q96PV0 1343 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 CFAP43Q8NDM7 1665 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 PPP1R12AO14974 1030 aaPredicted RBP14.05□□□□□ -0.16
HLCS-201ENST00000336648 TFDP2Q14188 446 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 SPARCL1Q14515 664 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 OR6B2Q6IFH4 312 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.05□□□□□ -0.16
HLCS-201ENST00000336648 ZNF212Q9UDV6 495 aa14.05□□□□□ -0.16
HLCS-201ENST00000336648 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 GOLGA8SH3BPF8 625 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 KDM1AO60341 852 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 KRT8P05787 483 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 AP3B2Q13367 1082 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms