RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 FAM196BA6NMK8 535 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 GOLGA8KD6RF30 607 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 FAM228BP0C875 321 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 HPDP32754 393 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 RNF187Q5TA31 235 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 TRIM6Q9C030 488 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 NT5C3AQ9H0P0 336 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 SERPINB13Q9UIV8 391 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 GLI1P08151 1106 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 NT5C2P49902 561 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 CYP4A11Q02928 519 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 PRR16Q569H4 304 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 EMBQ6PCB8 327 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 CABS1Q96KC9 395 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 PCDHA1Q9Y5I3 950 aa18.1■□□□□ 0.49
CDC42EP4-201ENST00000335793 GOLGA6L10A6NI86 522 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 ATP2B4P23634 1241 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 HNRNPH3P31942 346 aaKnown RBP18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 RPS6KA1Q15418 735 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 USH1GQ495M9 461 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 ODF2Q5BJF6 829 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 SEPT11Q9NVA2 429 aaKnown RBP18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 ATP6V0A2Q9Y487 856 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 POTEFA5A3E0 1075 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 POTEIP0CG38 1075 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 ZNF76P36508 570 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 KCNH2Q12809 1159 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 PAK2Q13177 524 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 NNTQ13423 1086 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 SNX1Q13596 522 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 POTEGQ6S5H5 508 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 POTEEQ6S8J3 1075 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 SCLT1Q96NL6 688 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 PLCD4Q9BRC7 762 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 MXD3Q9BW11 206 aa18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 NUCKS1Q9H1E3 243 aaKnown RBP18.09■□□□□ 0.49
CDC42EP4-201ENST00000335793 ZKSCAN4Q969J2 545 aaPredicted RBP18.08■□□□□ 0.49
CDC42EP4-201ENST00000335793 ZIM3Q96PE6 472 aa18.08■□□□□ 0.49
CDC42EP4-201ENST00000335793 TSKSQ9UJT2 592 aa18.08■□□□□ 0.49
CDC42EP4-201ENST00000335793 SSU72P8A0A1W2PR75 194 aa18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 ESYT2A0FGR8 921 aa18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 PPP1R12BO60237 982 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 RHBDL3P58872 404 aa18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 PRPF4BQ13523 1007 aaKnown RBP18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 DOK7Q18PE1 504 aa18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 PROM2Q8N271 834 aa18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 RNF10Q8N5U6 811 aaKnown RBP18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 DAGLAQ9Y4D2 1042 aa18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 PCDHB13Q9Y5F0 798 aa18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 ENO4A6NNW6 628 aa18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 PRLRP16471 622 aa18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 ARMCX3Q9UH62 379 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP4-201ENST00000335793 PHLPP1O60346 1717 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 HLA-DOAP06340 250 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 FAM153BP0C7A2 387 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 FAM153CQ494X1 144 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 TBC1D22AQ8WUA7 517 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 AP1M1Q9BXS5 423 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 ZC3H12CQ9C0D7 883 aaKnown RBP18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 KIF9Q9HAQ2 790 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 CPSF2Q9P2I0 782 aaKnown RBP18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 FAM153AQ9UHL3 310 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 AFF2P51816 1311 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 RPS6KA5O75582 802 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 KIAA0754O94854 1291 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 SLC9A1P19634 815 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 CACNB3P54284 484 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 INHBEP58166 350 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 TNNC1P63316 161 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 ZNF543Q08ER8 600 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 HAS1Q92839 578 aa18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 RBM17Q96I25 401 aaKnown RBP18.07■□□□□ 0.48
CDC42EP4-201ENST00000335793 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 CLIC2O15247 247 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 TLR2O60603 784 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 SLC18A3Q16572 532 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 CEP85LQ5SZL2 805 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 PRR5LQ6MZQ0 368 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 BARGINQ6ZT62 677 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 OTUD6BQ8N6M0 293 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 DNAJC19Q96DA6 116 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 HDAC9Q9UKV0 1011 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 SFI1A8K8P3 1242 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 GNA14O95837 355 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 TRADDQ15628 312 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 RC3H1Q5TC82 1133 aaKnown RBP18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 HGSNATQ68CP4 663 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 CASZ1Q86V15 1759 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 ROBO3Q96MS0 1386 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 A0A1B0GUL6 1792 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 KDM3AQ9Y4C1 1321 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 hCG_1984214I3L0E3 225 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 ZBTB5O15062 677 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 SSR1P43307 286 aaKnown RBP18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 ORC2Q13416 577 aaPredicted RBP18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 ALS2CLQ60I27 953 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 ZNF713Q8N859 430 aaPredicted RBP18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 POLLQ9UGP5 575 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 DNM3Q9UQ16 869 aa18.06■□□□□ 0.48
CDC42EP4-201ENST00000335793 SMARCA1P28370 1054 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms