RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 VTI1AQ96AJ9 217 aa15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 SMARCAD1Q9H4L7 1026 aa15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 RCOR1Q9UKL0 485 aa15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 SRPRBQ9Y5M8 271 aaKnown RBP15.83■□□□□ 0.12
APOBEC3B-202ENST00000335760 A0A1W2PQ45 241 aaPredicted RBP15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 A0A1W2PQY0 241 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 H3BRB1 525 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 PPP6R2O75170 966 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 CABYRO75952 493 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 F2P00734 622 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 PSEN2P49810 448 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 PSMC6P62333 389 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 PLPPR4Q7Z2D5 763 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 KRI1Q8N9T8 703 aaKnown RBP15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 BANK1Q8NDB2 785 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 ERMNQ8TAM6 284 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 LEO1Q8WVC0 666 aaPredicted RBP15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 KAT2BQ92831 832 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 DYDC2Q96IM9 177 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 SPATA32Q96LK8 384 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 GLT1D1Q96MS3 346 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 CLIC6Q96NY7 704 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 EIF2AK1Q9BQI3 630 aaKnown RBP15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 KATNAL1Q9BW62 490 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 TUT1Q9H6E5 874 aaKnown RBP15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 RGL1Q9NZL6 768 aa15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 ZNF215Q9UL58 517 aaPredicted RBP15.82■□□□□ 0.12
APOBEC3B-202ENST00000335760 TCHHQ07283 1943 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 PP2D1A8MPX8 630 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 P4HBP07237 508 aaKnown RBP15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 MARK3P27448 753 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 LONP1P36776 959 aaKnown RBP15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 CYP4A11Q02928 519 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 MFSD10Q14728 455 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 UGCGQ16739 394 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 AFAP1L1Q8TED9 768 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 PAWRQ96IZ0 340 aaKnown RBP15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 SENP6Q9GZR1 1112 aaPredicted RBP15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 SCAND2PQ9GZW5 306 aaPredicted RBP15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 CSRNP2Q9H175 543 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 C11orf49Q9H6J7 331 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 GDPD2Q9HCC8 539 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 STARD7Q9NQZ5 370 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 ERAP1Q9NZ08 941 aa15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 MAFBQ9Y5Q3 323 aaPredicted RBP15.81■□□□□ 0.12
APOBEC3B-202ENST00000335760 KIAA0100Q14667 2235 aaKnown RBP15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 WDR81Q562E7 1941 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 IGSF9BQ9UPX0 1349 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 HAS3O00219 553 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 SLITRK3O94933 977 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 CDC25AP30304 524 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 QARSP47897 775 aaKnown RBP15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 ME1P48163 572 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 PSMC5P62195 406 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 CTTNQ14247 550 aaKnown RBP15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 KIAA0753Q2KHM9 967 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 KRT79Q5XKE5 535 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 NECAB2Q7Z6G3 386 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 TPH2Q8IWU9 490 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 CKAP2LQ8IYA6 745 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 NEK9Q8TD19 979 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 SNX29Q8TEQ0 813 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 PPP1R13LQ8WUF5 828 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 ATP6V0A1Q93050 837 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 AK8Q96MA6 479 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 HSD17B14Q9BPX1 270 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 STK24Q9Y6E0 443 aa15.8■□□□□ 0.12
APOBEC3B-202ENST00000335760 MYH9P35579 1960 aaKnown RBP15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 ZNF862O60290 1169 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 DKC1O60832 514 aaKnown RBP eCLIP15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 CUTAO60888 179 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 MED24O75448 989 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 COL6A1P12109 1028 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 ATP4AP20648 1035 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 CCT6AP40227 531 aaKnown RBP15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 SLC26A2P50443 739 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 ITGA7Q13683 1181 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 PLCB4Q15147 1175 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 NBPF20Q3BBV1 942 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 SPECC1Q5M775 1068 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 HAUS3Q68CZ6 603 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 TRMT1LQ7Z2T5 733 aaKnown RBP15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 LXNQ9BS40 222 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 POLR3CQ9BUI4 534 aaPredicted RBP15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 RNPEPQ9H4A4 650 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 PCDHA7Q9UN72 937 aa15.79■□□□□ 0.12
APOBEC3B-202ENST00000335760 GRIN2DO15399 1336 aa15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 A0A0U1RQG5 324 aaPredicted RBP15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 SPATA31C1P0DKV0 1188 aa15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 RPA1P27694 616 aa15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 UBA7P41226 1012 aa15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 PRKCEQ02156 737 aa15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 CABP7Q86V35 215 aa15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 CATSPER3Q86XQ3 398 aa15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 MMTAG2Q9BU76 263 aaKnown RBP15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 ZSWIM4Q9H7M6 989 aa15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 TUFT1Q9NNX1 390 aa15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 WRAP73Q9P2S5 460 aaPredicted RBP15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 TRPC6Q9Y210 931 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms