RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 GAS8O95995 478 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 ANXA13P27216 316 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 CNGA1P29973 690 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 SNRPFP62306 86 aaKnown RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 UBXN2AP68543 259 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 NBPF9Q3BBW0 867 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 MFSD14CQ5VZR4 134 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 ZNF746Q6NUN9 644 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-201ENST00000335508 GAS2L3Q86XJ1 694 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 PPM1KQ8N3J5 372 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 SLC9A2Q9UBY0 812 aa7.51□□□□□ -1.21
SF3B1-201ENST00000335508 PIK3C2AO00443 1686 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 TAF12Q16514 161 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 MAEAQ7L5Y9 396 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 CLEC10AQ8IUN9 316 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 GOLGA1Q92805 767 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 JAKMIP2Q96AA8 810 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 POLR3CQ9BUI4 534 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 FBXO28Q9NVF7 368 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 AHDC1Q5TGY3 1603 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 CTDNEP1O95476 244 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 SEPT14Q6ZU15 432 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 NIPA1Q7RTP0 329 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 FHDC1Q9C0D6 1143 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 PPME1Q9Y570 386 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 CHD2O14647 1828 aaKnown RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 A0A1W2PQC6 194 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 DDNO94850 711 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 RHOBTB3O94955 611 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 TXNP10599 105 aaKnown RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 CYP11B2P19099 503 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 PLCB3Q01970 1234 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 SREBF2Q12772 1141 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 MYBPC2Q14324 1141 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 KYAT1Q16773 422 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 SHC4Q6S5L8 630 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 CATSPER4Q7RTX7 472 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 ADGRA1Q86SQ6 560 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 CCDC117Q8IWD4 279 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 SECISBP2LQ93073 1101 aaKnown RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 SMARCAD1Q9H4L7 1026 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 ELP3Q9H9T3 547 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 ZFYVE28Q9HCC9 887 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 TBC1D7Q9P0N9 293 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 MORC2Q9Y6X9 1032 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 ZNF142P52746 1687 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 AFPP02771 609 aaKnown RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 MTERF2Q49AM1 385 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 NBPF12Q5TAG4 269 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 UTP14CQ5TAP6 766 aaKnown RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 HAUS6Q7Z4H7 955 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 UBL4BQ8N7F7 174 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 MXRA8Q9BRK3 442 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 MTRF1LQ9UGC7 380 aaKnown RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 MANSC4A6NHS7 340 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-201ENST00000335508 NDC80O14777 642 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 PLA2G6O60733 806 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 HSPA6P17066 643 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 MAPK4P31152 587 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 TATDN1Q6P1N9 297 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 ENGASEQ8NFI3 743 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 RPS6KC1Q96S38 1066 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 SYT17Q9BSW7 474 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 LZTFL1Q9NQ48 299 aa7.5□□□□□ -1.21
SF3B1-201ENST00000335508 ACTN4O43707 911 aaKnown RBP7.49□□□□□ -1.21
SF3B1-201ENST00000335508 GUCY1A2P33402 732 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 MFAP3P55082 362 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 ENOSF1Q7L5Y1 443 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 MAATS1Q7Z4T9 603 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 LXNQ9BS40 222 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 CLDN3O15551 220 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 NSFP46459 744 aaKnown RBP7.49□□□□□ -1.21
SF3B1-201ENST00000335508 TNFAIP2Q03169 654 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 RDH13Q8NBN7 331 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 RAD54LQ92698 747 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 NAPGQ99747 312 aaPredicted RBP7.49□□□□□ -1.21
SF3B1-201ENST00000335508 TSPYL1Q9H0U9 437 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 DDX4Q9NQI0 724 aaKnown RBP7.49□□□□□ -1.21
SF3B1-201ENST00000335508 KCNQ5Q9NR82 932 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 STIM2Q9P246 746 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 KIF20BQ96Q89 1820 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 NEFHP12036 1026 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 CIITAP33076 1130 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 RFC5P40937 340 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 MXD4Q14582 209 aaPredicted RBP7.49□□□□□ -1.21
SF3B1-201ENST00000335508 ABI1Q8IZP0 508 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 CCDC155Q8N6L0 562 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 DNERQ8NFT8 737 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 ERO1AQ96HE7 468 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 CHAMP1Q96JM3 812 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 PDLIM2Q96JY6 352 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 NUDT12Q9BQG2 462 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 POTEB3A0JP26 581 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 LGALS16A8MUM7 142 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 POTECB2RU33 542 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 CDC25BP30305 580 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 LAMC2Q13753 1193 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 SEPT7Q16181 437 aaKnown RBP7.49□□□□□ -1.21
SF3B1-201ENST00000335508 CFAP58Q5T655 872 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms