RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 SPDYE3A6NKU9 549 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 SPATA31C1P0DKV0 1188 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 PDE6BP35913 854 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 KLHL30Q0D2K2 578 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 MCTP2Q6DN12 878 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 REEP2Q9BRK0 252 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 HDAC9Q9UKV0 1011 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 COL11A2P13942 1736 aaPredicted RBP25.72■■□□□ 1.71
NDEL1-201ENST00000334527 FAM86B1E9PN63 330 aa25.72■■□□□ 1.71
NDEL1-201ENST00000334527 FAM86B2P0C5J1 330 aa25.72■■□□□ 1.71
NDEL1-201ENST00000334527 NAB2Q15742 525 aa25.72■■□□□ 1.71
NDEL1-201ENST00000334527 ASIC2Q16515 512 aa25.72■■□□□ 1.71
NDEL1-201ENST00000334527 SFR1Q86XK3 245 aa25.72■■□□□ 1.71
NDEL1-201ENST00000334527 GOLGA6L1Q8N7Z2 621 aa25.72■■□□□ 1.71
NDEL1-201ENST00000334527 SYT2Q8N9I0 419 aaPredicted RBP25.72■■□□□ 1.71
NDEL1-201ENST00000334527 AIPL1Q9NZN9 384 aa25.72■■□□□ 1.71
NDEL1-201ENST00000334527 A0A087X0T9 212 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 PALMO75781 387 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 FAM228BP0C875 321 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 MASTLQ96GX5 879 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 MS4A14Q96JA4 679 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 NDUFB10O96000 172 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 SREBF1P36956 1147 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 KNOP1Q1ED39 458 aaKnown RBP25.71■■□□□ 1.71
NDEL1-201ENST00000334527 ABCB5Q2M3G0 1257 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 GMCL1P1Q8NEA9 526 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 AFAP1L1Q8TED9 768 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 MRIQ9BWK5 157 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 RBM12Q9NTZ6 932 aaKnown RBP25.71■■□□□ 1.71
NDEL1-201ENST00000334527 CWC15Q9P013 229 aaKnown RBP25.71■■□□□ 1.71
NDEL1-201ENST00000334527 ADAMTS1Q9UHI8 967 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 TRAF3IP3Q9Y228 551 aa25.71■■□□□ 1.71
NDEL1-201ENST00000334527 TAL1P17542 331 aaPredicted RBP25.7■■□□□ 1.71
NDEL1-201ENST00000334527 KLRC1P26715 233 aa25.7■■□□□ 1.71
NDEL1-201ENST00000334527 SYDE2Q5VT97 1194 aa25.7■■□□□ 1.71
NDEL1-201ENST00000334527 SND1Q7KZF4 910 aaKnown RBP eCLIP25.7■■□□□ 1.71
NDEL1-201ENST00000334527 STIM2Q9P246 746 aa25.7■■□□□ 1.71
NDEL1-201ENST00000334527 AGPSO00116 658 aa25.7■■□□□ 1.7
NDEL1-201ENST00000334527 FOSP01100 380 aaPredicted RBP25.7■■□□□ 1.7
NDEL1-201ENST00000334527 CFAP221Q4G0U5 840 aa25.7■■□□□ 1.7
NDEL1-201ENST00000334527 ZNF622Q969S3 477 aaKnown RBP eCLIP25.7■■□□□ 1.7
NDEL1-201ENST00000334527 GMCL1Q96IK5 515 aa25.7■■□□□ 1.7
NDEL1-201ENST00000334527 ARMCX3Q9UH62 379 aaPredicted RBP25.7■■□□□ 1.7
NDEL1-201ENST00000334527 GOLGA6BA6NDN3 693 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 FTCDO95954 541 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 MYBP10242 640 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 ACTN1P12814 892 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 KIAA0753Q2KHM9 967 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 STRIP1Q5VSL9 837 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 C8orf74Q6P047 294 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 EPM2AIP1Q7L775 607 aaPredicted RBP25.69■■□□□ 1.7
NDEL1-201ENST00000334527 FRMD5Q7Z6J6 570 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 FAM20AQ96MK3 541 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 HOXD13P35453 343 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 CYP4A11Q02928 519 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 DACT2Q5SW24 774 aa25.69■■□□□ 1.7
NDEL1-201ENST00000334527 COL23A1Q86Y22 540 aaPredicted RBP25.69■■□□□ 1.7
NDEL1-201ENST00000334527 MSH4O15457 936 aa25.68■■□□□ 1.7
NDEL1-201ENST00000334527 HOXA13P31271 388 aaPredicted RBP25.68■■□□□ 1.7
NDEL1-201ENST00000334527 DNA2P51530 1060 aa25.68■■□□□ 1.7
NDEL1-201ENST00000334527 PACSIN1Q9BY11 444 aa25.68■■□□□ 1.7
NDEL1-201ENST00000334527 CALUO43852 315 aaPredicted RBP25.68■■□□□ 1.7
NDEL1-201ENST00000334527 AFPP02771 609 aaKnown RBP25.68■■□□□ 1.7
NDEL1-201ENST00000334527 SLC9A1P19634 815 aa25.68■■□□□ 1.7
NDEL1-201ENST00000334527 TRERF1Q96PN7 1200 aa25.68■■□□□ 1.7
NDEL1-201ENST00000334527 RNF14Q9UBS8 474 aa25.68■■□□□ 1.7
NDEL1-201ENST00000334527 STK24Q9Y6E0 443 aa25.68■■□□□ 1.7
NDEL1-201ENST00000334527 RSPH10B2B2RC85 870 aa25.67■■□□□ 1.7
NDEL1-201ENST00000334527 RSPH10BP0C881 870 aa25.67■■□□□ 1.7
NDEL1-201ENST00000334527 HDLBPQ00341 1268 aaKnown RBP25.67■■□□□ 1.7
NDEL1-201ENST00000334527 BHMT2Q9H2M3 363 aa25.67■■□□□ 1.7
NDEL1-201ENST00000334527 VAV3Q9UKW4 847 aa25.67■■□□□ 1.7
NDEL1-201ENST00000334527 PCDHGC5Q9Y5F6 944 aa25.67■■□□□ 1.7
NDEL1-201ENST00000334527 ECE2O60344 883 aa25.67■■□□□ 1.7
NDEL1-201ENST00000334527 MMP10P09238 476 aa25.67■■□□□ 1.7
NDEL1-201ENST00000334527 BMP3P12645 472 aa25.67■■□□□ 1.7
NDEL1-201ENST00000334527 MMP14P50281 582 aa25.67■■□□□ 1.7
NDEL1-201ENST00000334527 KRT27Q7Z3Y8 459 aa25.67■■□□□ 1.7
NDEL1-201ENST00000334527 CYP2W1Q8TAV3 490 aa25.67■■□□□ 1.7
NDEL1-201ENST00000334527 PDXKO00764 312 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 OPLAHO14841 1288 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 XRCC5P13010 732 aaKnown RBP25.66■■□□□ 1.7
NDEL1-201ENST00000334527 CIITAP33076 1130 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 EPHB4P54760 987 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 FKBP1AP62942 108 aaKnown RBP25.66■■□□□ 1.7
NDEL1-201ENST00000334527 MEI1Q5TIA1 1274 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 SPAG5Q96R06 1193 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 PLCB1Q9NQ66 1216 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 SCN9AQ15858 1988 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 RPS6KA5O75582 802 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 GH2P01242 217 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 UCHL3P15374 230 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 ZNF76P36508 570 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 JAG1P78504 1218 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 PTK2Q05397 1052 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 GLE1Q53GS7 698 aaKnown RBP25.66■■□□□ 1.7
NDEL1-201ENST00000334527 DCAF17Q5H9S7 520 aaPredicted RBP25.66■■□□□ 1.7
NDEL1-201ENST00000334527 DPY19L2P1Q6NXN4 242 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 RUSC1Q9BVN2 902 aa25.66■■□□□ 1.7
NDEL1-201ENST00000334527 POLD4Q9HCU8 107 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms