RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 MCM3APO60318 1980 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 IGKV6D-21A0A0A0MT36 114 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 MSCO60682 206 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 HMGCRP04035 888 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 AMPD3Q01432 767 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 ITGB3BPQ13352 177 aaPredicted RBP10.61□□□□□ -0.71
C11orf54-201ENST00000331239 TMEM119Q4V9L6 283 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 DRC7Q8IY82 874 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 EXOC8Q8IYI6 725 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 AFAP1L1Q8TED9 768 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 PURBQ96QR8 312 aaKnown RBP10.61□□□□□ -0.71
C11orf54-201ENST00000331239 WDR81Q562E7 1941 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 GOLGA6L19H0YKK7 550 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 SLFN14P0C7P3 912 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 ZNF865P0CJ78 1059 aaPredicted RBP10.61□□□□□ -0.71
C11orf54-201ENST00000331239 PFKFB1P16118 471 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 SNW1Q13573 536 aaKnown RBP10.61□□□□□ -0.71
C11orf54-201ENST00000331239 BRDTQ58F21 947 aaPredicted RBP10.61□□□□□ -0.71
C11orf54-201ENST00000331239 FAM160B1Q5W0V3 765 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 PLPPR4Q7Z2D5 763 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 MIER3Q7Z3K6 550 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 C4orf19Q8IY42 314 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 SEPT1Q8WYJ6 367 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 ATP6V0A1Q93050 837 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 NACC1Q96RE7 527 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 TIPINQ9BVW5 301 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 ZSWIM4Q9H7M6 989 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 DISC1Q9NRI5 854 aa10.61□□□□□ -0.71
C11orf54-201ENST00000331239 LGR5O75473 907 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 FARP2O94887 1054 aaPredicted RBP10.6□□□□□ -0.71
C11orf54-201ENST00000331239 TXNP10599 105 aaKnown RBP10.6□□□□□ -0.71
C11orf54-201ENST00000331239 AKR1A1P14550 325 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 CYP2B6P20813 491 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 UBA1P22314 1058 aaKnown RBP10.6□□□□□ -0.71
C11orf54-201ENST00000331239 CDC25BP30305 580 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 PSMC5P62195 406 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 IQCB1Q15051 598 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 MAP3K21Q5TCX8 1036 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 RRAGBQ5VZM2 374 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 SARM1Q6SZW1 724 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 ABHD15Q6UXT9 468 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 SEPT14Q6ZU15 432 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 C11orf57Q6ZUT1 292 aaPredicted RBP10.6□□□□□ -0.71
C11orf54-201ENST00000331239 CCDC186Q7Z3E2 898 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 PPTC7Q8NI37 304 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 CD99L2Q8TCZ2 262 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 CDK5RAP3Q96JB5 506 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 FAM167AQ96KS9 214 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 SEZ6LQ9BYH1 1024 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 UNC45AQ9H3U1 944 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 ANKEF1Q9NU02 776 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 DBR1Q9UK59 544 aaKnown RBP10.6□□□□□ -0.71
C11orf54-201ENST00000331239 DUSP11O75319 330 aaKnown RBP10.6□□□□□ -0.71
C11orf54-201ENST00000331239 PPFIA4O75335 1185 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 ZNF202O95125 648 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 QARSP47897 775 aaKnown RBP10.6□□□□□ -0.71
C11orf54-201ENST00000331239 HTRA3P83110 453 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 PRKCZQ05513 592 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 E2F4Q16254 413 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 MTERF4Q7Z6M4 381 aaKnown RBP10.6□□□□□ -0.71
C11orf54-201ENST00000331239 CLIC6Q96NY7 704 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 EIF2AK1Q9BQI3 630 aaKnown RBP10.6□□□□□ -0.71
C11orf54-201ENST00000331239 MMTAG2Q9BU76 263 aaKnown RBP10.6□□□□□ -0.71
C11orf54-201ENST00000331239 UPF3AQ9H1J1 476 aaKnown RBP10.6□□□□□ -0.71
C11orf54-201ENST00000331239 ANO10Q9NW15 660 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 EMSYQ7Z589 1322 aa10.6□□□□□ -0.71
C11orf54-201ENST00000331239 ATP9AO75110 1047 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 SUPT20HL2P0C7V6 817 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 CYBAP13498 195 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 SCP2P22307 547 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 GTF2F1P35269 517 aaKnown RBP eCLIP10.59□□□□□ -0.71
C11orf54-201ENST00000331239 CCT6AP40227 531 aaKnown RBP10.59□□□□□ -0.71
C11orf54-201ENST00000331239 CTCFP49711 727 aaPredicted RBP10.59□□□□□ -0.71
C11orf54-201ENST00000331239 TNFAIP2Q03169 654 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 CEP57L1Q8IYX8 460 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 RAET1EQ8TD07 263 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 SNX29Q8TEQ0 813 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 MLXIPQ9HAP2 919 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 KCNG1Q9UIX4 513 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 DNM3Q9UQ16 869 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 GNEQ9Y223 722 aaKnown RBP10.59□□□□□ -0.71
C11orf54-201ENST00000331239 MYH9P35579 1960 aaKnown RBP10.59□□□□□ -0.71
C11orf54-201ENST00000331239 SEPT4O43236 478 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 ADCY3O60266 1144 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 NDUFA8P51970 172 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 ACTR2P61160 394 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 NCAPH2Q6IBW4 605 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 KRBA2Q6ZNG9 492 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 OTUD6AQ7L8S5 288 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 SH3RF1Q7Z6J0 888 aa10.59□□□□□ -0.71
C11orf54-201ENST00000331239 MAFBQ9Y5Q3 323 aaPredicted RBP10.59□□□□□ -0.71
C11orf54-201ENST00000331239 A6NJR5 290 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 BECN2A8MW95 431 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 ZEB2O60315 1214 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 SLITRK3O94933 977 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 EYA4O95677 639 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 GGPS1O95749 300 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 SPATA31C1P0DKV0 1188 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 STAT6P42226 847 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 CPT1AP50416 773 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms