RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ATG3Q9NT62 314 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 TMEM63CQ9P1W3 806 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 CAPN11Q9UMQ6 739 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 SCAF8Q9UPN6 1271 aaKnown RBP11.38□□□□□ -0.59
CLN8-201ENST00000331222 XDHP47989 1333 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 ATP5JP18859 108 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 PROSER3Q2NL68 480 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 PCDHA4Q9UN74 947 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 EPN1Q9Y6I3 576 aaPredicted RBP11.38□□□□□ -0.59
CLN8-201ENST00000331222 LRRD1A4D1F6 860 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 EIF4E1BA6NMX2 242 aaKnown RBP11.38□□□□□ -0.59
CLN8-201ENST00000331222 DDAH1O94760 285 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 RECQLP46063 649 aaPredicted RBP11.38□□□□□ -0.59
CLN8-201ENST00000331222 POU5F1BQ06416 359 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 TUBB2AQ13885 445 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 ZSCAN26Q16670 478 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 CATSPER4Q7RTX7 472 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 TUBB2BQ9BVA1 445 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 RRAGDQ9NQL2 400 aaPredicted RBP11.38□□□□□ -0.59
CLN8-201ENST00000331222 TEKT2Q9UIF3 430 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 GOLGA8KD6RF30 607 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 DNAJC6O75061 913 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 MOCS2O96007 188 aaPredicted RBP11.38□□□□□ -0.59
CLN8-201ENST00000331222 AP1B1Q10567 949 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 NR5A1Q13285 461 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 THEM5Q8N1Q8 247 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 PBXIP1Q96AQ6 731 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 SH3KBP1Q96B97 665 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 PCDHA7Q9UN72 937 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 ZFYVE9O95405 1425 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 SNX2O60749 519 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 IRF1P10914 325 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 PHKG2P15735 406 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 IL9RQ01113 521 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 SLFNL1Q499Z3 407 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 ZC3H12BQ5HYM0 836 aaKnown RBP11.37□□□□□ -0.59
CLN8-201ENST00000331222 LRRC8AQ8IWT6 810 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 POLR3CQ9BUI4 534 aaPredicted RBP11.37□□□□□ -0.59
CLN8-201ENST00000331222 GTSE1Q9NYZ3 720 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 H0YCG3 227 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 SOX11P35716 441 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 RFWD2Q8NHY2 731 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 NDFIP2Q9NV92 336 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 ABCA5Q8WWZ7 1642 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 ABCB11O95342 1321 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 K7ERI5 159 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 LBRQ14739 615 aaKnown RBP11.37□□□□□ -0.59
CLN8-201ENST00000331222 CROCCP2Q86T23 111 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 UBA6A0AVT1 1052 aaPredicted RBP11.37□□□□□ -0.59
CLN8-201ENST00000331222 SOWAHDA6NJG2 315 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 EEF1DP29692 281 aaKnown RBP11.37□□□□□ -0.59
CLN8-201ENST00000331222 BBS9Q3SYG4 887 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 TAGAPQ8N103 731 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 TESK2Q96S53 571 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 HEMGNQ9BXL5 484 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 EDEM3Q9BZQ6 932 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 GTPBP10A4D1E9 387 aaKnown RBP11.37□□□□□ -0.59
CLN8-201ENST00000331222 E5RI56 91 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 KLC3Q6P597 504 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 C11orf74Q86VG3 221 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 C2orf69Q8N8R5 385 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 BTN2A2Q8WVV5 523 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 ABHD8Q96I13 439 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 CPVLQ9H3G5 476 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 KIF17Q9P2E2 1029 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 MAP3K15Q6ZN16 1313 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 ZNF233A6NK53 670 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 SRGAP2O75044 1071 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 KRT10P13645 584 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 ANKRD20A4Q4UJ75 823 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 ANKRD20A8PQ5CZ79 823 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 ANKRD20A2Q5SQ80 823 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 THEMIS2Q5TEJ8 643 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 ANKRD20A1Q5TYW2 823 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 NUDCD3Q8IVD9 361 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 EFCAB13Q8IY85 973 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 RASEFQ8IZ41 740 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 ANTXR1Q9H6X2 564 aa11.37□□□□□ -0.59
CLN8-201ENST00000331222 TTC7AQ9ULT0 858 aaPredicted RBP11.37□□□□□ -0.59
CLN8-201ENST00000331222 ERVV-2B6SEH9 535 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 DFFAO00273 331 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 ZBED1O96006 694 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 MT-ND3P03897 115 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 PSAPP07602 524 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 EAF2Q96CJ1 260 aaPredicted RBP11.36□□□□□ -0.59
CLN8-201ENST00000331222 WDR62O43379 1518 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 ZNF518AQ6AHZ1 1483 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 FAM83BQ5T0W9 1011 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 RNF207Q6ZRF8 634 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 RAD18Q9NS91 495 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 ZHX2Q9Y6X8 837 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 WDR17Q8IZU2 1322 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 LCORLQ8N3X6 602 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 SIK2Q9H0K1 926 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 LMBRD1Q9NUN5 540 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 KLHL8Q9P2G9 620 aaPredicted RBP11.36□□□□□ -0.59
CLN8-201ENST00000331222 DAAM1Q9Y4D1 1078 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 PRAG1Q86YV5 1406 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 ABCC4O15439 1325 aa11.36□□□□□ -0.59
CLN8-201ENST00000331222 AGRPO00253 132 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms