RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 SLCO1A2P46721 670 aa14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 SLC18A3Q16572 532 aa14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 FAM98CQ17RN3 349 aaKnown RBP14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 SLC35G1Q2M3R5 365 aa14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 CDCA2Q69YH5 1023 aaPredicted RBP14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 ATP6V0A2Q9Y487 856 aa14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 COL18A1P39060 1754 aa14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 ACTN1P12814 892 aa14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 KLHL30Q0D2K2 578 aa14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 CCDC38Q502W7 563 aa14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 CNNM4Q6P4Q7 775 aa14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 LRRC55Q6ZSA7 311 aa14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 ADAM7Q9H2U9 754 aa14.69□□□□□ -0.06
CCDC88C-201ENST00000331194 CALM1P0DP23 149 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 CALM2P0DP24 149 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 CALM3P0DP25 149 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 GIGYF2Q6Y7W6 1299 aaKnown RBP14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 TRPM8Q7Z2W7 1104 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 DDAH1O94760 285 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 LRRC14Q15048 493 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 CCDC113Q9H0I3 377 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 ANAPC4Q9UJX5 808 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 IGF2BP3O00425 579 aaKnown RBP eCLIP14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 TXKP42681 527 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 GYG1P46976 350 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 RBM5P52756 815 aaKnown RBP eCLIP14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 AP1ARQ63HQ0 302 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 MIS18BP1Q6P0N0 1132 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 ANKS4BQ8N8V4 417 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 ATXN2LQ8WWM7 1075 aaKnown RBP14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 TLCD1Q96CP7 247 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 SLC4A9Q96Q91 983 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 PLCD4Q9BRC7 762 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 RIOK1Q9BRS2 568 aaKnown RBP14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 FGFBP2Q9BYJ0 223 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 AZI2Q9H6S1 392 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 IRAK4Q9NWZ3 460 aa14.68□□□□□ -0.06
CCDC88C-201ENST00000331194 FOXO6A8MYZ6 492 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 M0R2N6 131 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 TRAF5O00463 557 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 MYL1P05976 194 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 KRT16P08779 473 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 GOLGA8HP0CJ92 632 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 ABL2P42684 1182 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 PTK2Q05397 1052 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 PIGWQ7Z7B1 504 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 SAAL1Q96ER3 474 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 NGLY1Q96IV0 654 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 MLXIPLQ9NP71 852 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 PNMA3Q9UL41 463 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 BCORQ6W2J9 1755 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 SMNDC1O75940 238 aaKnown RBP eCLIP14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 CALML3P27482 149 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 MGARPQ8TDB4 240 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 GLG1Q92896 1179 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 BORCS6Q96GS4 357 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 NUDT12Q9BQG2 462 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 KCNMB3Q9NPA1 279 aa14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 SPATS2LQ9NUQ6 558 aaKnown RBP14.67□□□□□ -0.06
CCDC88C-201ENST00000331194 PGRMC1O00264 195 aaKnown RBP14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 RARAP10276 462 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 NQO1P15559 274 aaKnown RBP14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 USP11P51784 963 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 NCALDP61601 193 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 NELFCDQ8IXH7 590 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 ZNF384Q8TF68 577 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 EPB41L4BQ9H329 900 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 ECT2Q9H8V3 914 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 BLOC1S4Q9NUP1 217 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 SWAP70Q9UH65 585 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 CYTH3O43739 400 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 PDE8AO60658 829 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 CLSTN1O94985 981 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 ARMC3Q5W041 872 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 ARMC9Q7Z3E5 817 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 SLC17A8Q8NDX2 589 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 GJA10Q969M2 543 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 SLC5A4Q9NY91 659 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 NOP53Q9NZM5 478 aaKnown RBP14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 CEP72Q9P209 647 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 TSPY2A6NKD2 308 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 OR52Z1P0C646 297 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 PRPF4BQ13523 1007 aaKnown RBP14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 TRIM68Q6AZZ1 485 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 ZNF571Q7Z3V5 609 aaPredicted RBP14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 KCNK18Q7Z418 384 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 DAAM2Q86T65 1068 aa14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 DZIP3Q86Y13 1208 aaKnown RBP14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 RNF25Q96BH1 459 aaPredicted RBP14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.66□□□□□ -0.063e-6■■■■■ 30.2
CCDC88C-201ENST00000331194 DBR1Q9UK59 544 aaKnown RBP14.66□□□□□ -0.06
CCDC88C-201ENST00000331194 SPDYE3A6NKU9 549 aa14.65□□□□□ -0.06
CCDC88C-201ENST00000331194 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
CCDC88C-201ENST00000331194 SV2BQ7L1I2 683 aa14.65□□□□□ -0.06
CCDC88C-201ENST00000331194 INTS9Q9NV88 658 aaKnown RBP14.65□□□□□ -0.06
CCDC88C-201ENST00000331194 SAMD15Q9P1V8 674 aa14.65□□□□□ -0.06
CCDC88C-201ENST00000331194 MROH5Q6ZUA9 1318 aa14.65□□□□□ -0.06
CCDC88C-201ENST00000331194 MAP3K13O43283 966 aa14.65□□□□□ -0.06
CCDC88C-201ENST00000331194 EVI5O60447 810 aa14.65□□□□□ -0.06
CCDC88C-201ENST00000331194 PLTPP55058 493 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms