RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CCND2P30279 289 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 TBX2Q13207 712 aaPredicted RBP22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 MAP1SQ66K74 1059 aaPredicted RBP22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 SPECC1LQ69YQ0 1117 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 XRRA1Q6P2D8 792 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 KIF18AQ8NI77 898 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 VPS16Q9H269 839 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 TAB2Q9NYJ8 693 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 TRAF5O00463 557 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 MUTP22033 750 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 COPB1P53618 953 aaKnown RBP22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 IRX3P78415 501 aaPredicted RBP22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 NAA30Q147X3 362 aaPredicted RBP22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 MIER3Q7Z3K6 550 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 MB21D1Q8N884 522 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 CHST13Q8NET6 341 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 NOC3LQ8WTT2 800 aaKnown RBP22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 REEP2Q9BRK0 252 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 RUSC1Q9BVN2 902 aa22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 ASCC2Q9H1I8 757 aaPredicted RBP22.5■■□□□ 1.19
RIPPLY3-201ENST00000329553 MOGSQ13724 837 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 BANK1Q8NDB2 785 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 ANKRD20A12PQ8NF67 263 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 PPP1R13BQ96KQ4 1090 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 ZHX3Q9H4I2 956 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 TBC1D22BQ9NU19 505 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 AGTPBP1Q9UPW5 1226 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 N4BP3O15049 544 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 PBX1P40424 430 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 RINT1Q6NUQ1 792 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 MYOCDQ8IZQ8 938 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 NACC1Q96RE7 527 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 LXNQ9BS40 222 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 MAF1Q9H063 256 aa22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 CGNQ9P2M7 1197 aaKnown RBP22.49■■□□□ 1.19
RIPPLY3-201ENST00000329553 GJA5P36382 358 aa22.48■■□□□ 1.19
RIPPLY3-201ENST00000329553 RIOX2Q8IUF8 465 aa22.48■■□□□ 1.19
RIPPLY3-201ENST00000329553 NRDCO43847 1150 aa22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 EEF1GP26641 437 aaKnown RBP22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 HERVK_113P62684 666 aa22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 CBX1P83916 185 aa22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 GOLGA8FQ08AF8 430 aa22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 GOLGA8DPQ0D2H9 430 aa22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 SPATC1LQ9H0A9 340 aa22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 ZNF408Q9H9D4 720 aa22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 POLD4Q9HCU8 107 aa22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 ZNF215Q9UL58 517 aaPredicted RBP22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 NEK9Q8TD19 979 aa22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 INPP4AQ96PE3 977 aaPredicted RBP22.47■■□□□ 1.19
RIPPLY3-201ENST00000329553 A0A0G2JMZ2 1700 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 RSPH10B2B2RC85 870 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 RGS20O76081 388 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 P4HBP07237 508 aaKnown RBP22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 RSPH10BP0C881 870 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 C1orf186Q6ZWK4 172 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 ANKRD35Q8N283 1001 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 GPRASP2Q96D09 838 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 PAGR1Q9BTK6 254 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 BCAS3Q9H6U6 928 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 MAGEC2Q9UBF1 373 aaPredicted RBP22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 SAMM50Q9Y512 469 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 CNMDO75829 334 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 TUBB4AP04350 444 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 FASTKD5Q7L8L6 764 aaKnown RBP22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 SLC10A4Q96EP9 437 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 ERO1AQ96HE7 468 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 TMX1Q9H3N1 280 aa22.46■■□□□ 1.19
RIPPLY3-201ENST00000329553 CNTN2Q02246 1040 aa22.45■■□□□ 1.18
RIPPLY3-201ENST00000329553 GPAT2Q6NUI2 795 aa22.45■■□□□ 1.18
RIPPLY3-201ENST00000329553 NLRX1Q86UT6 975 aa22.45■■□□□ 1.18
RIPPLY3-201ENST00000329553 SFR1Q86XK3 245 aa22.45■■□□□ 1.18
RIPPLY3-201ENST00000329553 SCFD1Q8WVM8 642 aa22.45■■□□□ 1.18
RIPPLY3-201ENST00000329553 LCTP09848 1927 aa22.45■■□□□ 1.18
RIPPLY3-201ENST00000329553 MAFGO15525 162 aa22.45■■□□□ 1.18
RIPPLY3-201ENST00000329553 LRRC63Q05C16 580 aa22.45■■□□□ 1.18
RIPPLY3-201ENST00000329553 NCAPG2Q86XI2 1143 aa22.45■■□□□ 1.18
RIPPLY3-201ENST00000329553 L2HGDHQ9H9P8 463 aa22.45■■□□□ 1.18
RIPPLY3-201ENST00000329553 FBXO40Q9UH90 709 aa22.45■■□□□ 1.18
RIPPLY3-201ENST00000329553 CCNE2O96020 404 aa22.44■■□□□ 1.18
RIPPLY3-201ENST00000329553 CASP5P51878 434 aa22.44■■□□□ 1.18
RIPPLY3-201ENST00000329553 CNOT6LQ96LI5 555 aaKnown RBP22.44■■□□□ 1.18
RIPPLY3-201ENST00000329553 MOV10L1Q9BXT6 1211 aaKnown RBP22.44■■□□□ 1.18
RIPPLY3-201ENST00000329553 R3HDMLQ9H3Y0 253 aa22.44■■□□□ 1.18
RIPPLY3-201ENST00000329553 ZSWIM4Q9H7M6 989 aa22.44■■□□□ 1.18
RIPPLY3-201ENST00000329553 KIAA1217Q5T5P2 1943 aa22.44■■□□□ 1.18
RIPPLY3-201ENST00000329553 ASTN1O14525 1302 aa22.44■■□□□ 1.18
RIPPLY3-201ENST00000329553 ZCWPW2Q504Y3 356 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 FAM114A1Q8IWE2 563 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 NELFCDQ8IXH7 590 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 TUBGCP2Q9BSJ2 902 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 TXNRD2Q9NNW7 524 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 RBPJLQ9UBG7 517 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 SPDYE4A6NLX3 237 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 SFI1A8K8P3 1242 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 SLU7O95391 586 aaKnown RBP22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 QARSP47897 775 aaKnown RBP22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 ADKP55263 362 aaKnown RBP22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 FSTL1Q12841 308 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 FOXR2Q6PJQ5 311 aa22.43■■□□□ 1.18
RIPPLY3-201ENST00000329553 TC2NQ8N9U0 490 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms