RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 PTPROQ16827 1216 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 SPDYCQ5MJ68 293 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 UNC13DQ70J99 1090 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 DAGLBQ8NCG7 672 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 MICAL1Q8TDZ2 1067 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 PARD3BQ8TEW8 1205 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 ATP8B4Q8TF62 1192 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 BRIP1Q9BX63 1249 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 CELF4Q9BZC1 486 aaKnown RBP13.96□□□□□ -0.18
CCDC60-201ENST00000327554 CCDC134Q9H6E4 229 aa13.96□□□□□ -0.18
CCDC60-201ENST00000327554 LIN7AO14910 233 aaPredicted RBP13.95□□□□□ -0.18
CCDC60-201ENST00000327554 UBOX5O94941 541 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 OR52Z1P0C646 297 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 DYNLL1P63167 89 aaKnown RBP13.95□□□□□ -0.18
CCDC60-201ENST00000327554 POU5F1Q01860 360 aaKnown RBP13.95□□□□□ -0.18
CCDC60-201ENST00000327554 ARID5AQ03989 594 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 BLMHQ13867 455 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 RAPGEF1Q13905 1077 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 NBPF20Q3BBV1 942 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 FAM47AQ5JRC9 791 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 RASGEF1CQ8N431 466 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 PRCCQ92733 491 aaPredicted RBP13.95□□□□□ -0.18
CCDC60-201ENST00000327554 DPH5Q9H2P9 285 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 FAM114A2Q9NRY5 505 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 BLOC1S4Q9NUP1 217 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 AIPL1Q9NZN9 384 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 SAMD15Q9P1V8 674 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 ATP8A1Q9Y2Q0 1164 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 PCDH11XQ9BZA7 1347 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 PCDH11YQ9BZA8 1340 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 CCND1P24385 295 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 KLHL30Q0D2K2 578 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 AP1ARQ63HQ0 302 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 TMED8Q6PL24 325 aaPredicted RBP13.95□□□□□ -0.18
CCDC60-201ENST00000327554 HOOK3Q86VS8 718 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 SPICE1Q8N0Z3 855 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 FAM133AQ8N9E0 248 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 GLIS3Q8NEA6 775 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 PGM2Q96G03 612 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 SELENOSQ9BQE4 189 aa13.95□□□□□ -0.18
CCDC60-201ENST00000327554 TRMT112Q9UI30 125 aaKnown RBP13.95□□□□□ -0.18
CCDC60-201ENST00000327554 PVALEFA0A1B0GWK0 134 aa13.94□□□□□ -0.18
CCDC60-201ENST00000327554 ENO4A6NNW6 628 aa13.94□□□□□ -0.18
CCDC60-201ENST00000327554 NUDT17P0C025 328 aa13.94□□□□□ -0.18
CCDC60-201ENST00000327554 ABL2P42684 1182 aa13.94□□□□□ -0.18
CCDC60-201ENST00000327554 ENOX2Q16206 610 aaKnown RBP13.94□□□□□ -0.18
CCDC60-201ENST00000327554 DZIP3Q86Y13 1208 aaKnown RBP13.94□□□□□ -0.18
CCDC60-201ENST00000327554 DHX37Q8IY37 1157 aaKnown RBP13.94□□□□□ -0.18
CCDC60-201ENST00000327554 SHANK3Q9BYB0 1731 aa13.94□□□□□ -0.18
CCDC60-201ENST00000327554 A6NHS1 94 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 A8MUI8 341 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 OAS1P00973 400 aaKnown RBP13.93□□□□□ -0.18
CCDC60-201ENST00000327554 LINGO3P0C6S8 592 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 SLC35G1Q2M3R5 365 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 GALNTL6Q49A17 601 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 ERICH1Q86X53 443 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
CCDC60-201ENST00000327554 CCDC26Q8TAB7 109 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 ZBTB10Q96DT7 871 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 TRIM51Q9BSJ1 452 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 STXBP5LQ9Y2K9 1186 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 IGF2BP3O00425 579 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCDC60-201ENST00000327554 KIF5BP33176 963 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 TECP42680 631 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 GRB10Q13322 594 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 LRRC41Q15345 812 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 ASIC2Q16515 512 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 ZCWPW2Q504Y3 356 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 FOXR2Q6PJQ5 311 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 SV2BQ7L1I2 683 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 DYMQ7RTS9 669 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 DNAJC10Q8IXB1 793 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 FMO2Q99518 471 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 PRMT1Q99873 361 aaKnown RBP13.93□□□□□ -0.18
CCDC60-201ENST00000327554 ECT2Q9H8V3 914 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 ETAA1Q9NY74 926 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCDC60-201ENST00000327554 COL4A3BPQ9Y5P4 624 aa13.93□□□□□ -0.18
CCDC60-201ENST00000327554 USP17L12C9JPN9 530 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 USP17L21D6R901 530 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 KRT16P08779 473 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 IFI16Q16666 785 aaKnown RBP13.92□□□□□ -0.18
CCDC60-201ENST00000327554 DNAAF5Q86Y56 855 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 PROM2Q8N271 834 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 TPCN2Q8NHX9 752 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 ZCRB1Q8TBF4 217 aaKnown RBP13.92□□□□□ -0.18
CCDC60-201ENST00000327554 GANQ9H2C0 597 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 ZDHHC18Q9NUE0 388 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 INTS9Q9NV88 658 aaKnown RBP13.92□□□□□ -0.18
CCDC60-201ENST00000327554 ABCF2Q9UG63 623 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 UTP11Q9Y3A2 253 aaKnown RBP13.92□□□□□ -0.18
CCDC60-201ENST00000327554 TOGARAM1Q9Y4F4 1720 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 ZNF142P52746 1687 aaPredicted RBP13.92□□□□□ -0.18
CCDC60-201ENST00000327554 SNX3O60493 162 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 VIMP08670 466 aaKnown RBP13.92□□□□□ -0.18
CCDC60-201ENST00000327554 CCNG1P51959 295 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 IFI35P80217 286 aaPredicted RBP13.92□□□□□ -0.18
CCDC60-201ENST00000327554 PTK2Q05397 1052 aa13.92□□□□□ -0.18
CCDC60-201ENST00000327554 NKX1-1Q15270 411 aaPredicted RBP13.92□□□□□ -0.18
CCDC60-201ENST00000327554 C10orf76Q5T2E6 689 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms