RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 PRPF38AQ8NAV1 312 aaKnown RBP13.21□□□□□ -0.29
NLRC3-201ENST00000324659 ANKS1AQ92625 1134 aa13.21□□□□□ -0.29
NLRC3-201ENST00000324659 LZTS2Q9BRK4 669 aa13.21□□□□□ -0.29
NLRC3-201ENST00000324659 TRPC5Q9UL62 973 aaPredicted RBP13.21□□□□□ -0.29
NLRC3-201ENST00000324659 SCN7AQ01118 1682 aa13.21□□□□□ -0.29
NLRC3-201ENST00000324659 POTEB3A0JP26 581 aa13.21□□□□□ -0.3
NLRC3-201ENST00000324659 CCDC189A1A4V9 331 aa13.21□□□□□ -0.3
NLRC3-201ENST00000324659 POTECB2RU33 542 aa13.21□□□□□ -0.3
NLRC3-201ENST00000324659 MEFVO15553 781 aaPredicted RBP13.21□□□□□ -0.3
NLRC3-201ENST00000324659 LCA5LO95447 670 aa13.21□□□□□ -0.3
NLRC3-201ENST00000324659 ATP2B4P23634 1241 aa13.21□□□□□ -0.3
NLRC3-201ENST00000324659 DCAF17Q5H9S7 520 aaPredicted RBP13.21□□□□□ -0.3
NLRC3-201ENST00000324659 TTBK2Q6IQ55 1244 aa13.21□□□□□ -0.3
NLRC3-201ENST00000324659 POTEBQ6S5H4 581 aa13.21□□□□□ -0.3
NLRC3-201ENST00000324659 RNF217Q8TC41 542 aa13.21□□□□□ -0.3
NLRC3-201ENST00000324659 SPAG5Q96R06 1193 aa13.21□□□□□ -0.3
NLRC3-201ENST00000324659 CEP72Q9P209 647 aa13.21□□□□□ -0.3
NLRC3-201ENST00000324659 DDX25Q9UHL0 483 aaKnown RBP13.21□□□□□ -0.3
NLRC3-201ENST00000324659 ATP6V0A2Q9Y487 856 aa13.21□□□□□ -0.3
NLRC3-201ENST00000324659 KIAA1551Q9HCM1 1747 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 PJA2O43164 708 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 STAT3P40763 770 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 ASIC2Q16515 512 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 ODF2Q5BJF6 829 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 TBC1D16Q8TBP0 767 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 CAVIN3Q969G5 261 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 TRIM31Q9BZY9 425 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 LAMB1P07942 1786 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 GOLGA6L7A0A1B0GV03 622 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 MMP10P09238 476 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 PDHBP11177 359 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 HDLBPQ00341 1268 aaKnown RBP13.2□□□□□ -0.3
NLRC3-201ENST00000324659 ITIH3Q06033 890 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 KRT27Q7Z3Y8 459 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 GPBP1Q86WP2 473 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 SLF2Q8IX21 1173 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 TBC1D31Q96DN5 1066 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 DDX47Q9H0S4 455 aaKnown RBP13.2□□□□□ -0.3
NLRC3-201ENST00000324659 LUC7LQ9NQ29 371 aaKnown RBP13.2□□□□□ -0.3
NLRC3-201ENST00000324659 BMP2KQ9NSY1 1161 aaPredicted RBP13.2□□□□□ -0.3
NLRC3-201ENST00000324659 GRID2IPA4D2P6 1211 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 MEIS1O00470 390 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
NLRC3-201ENST00000324659 ADAM9Q13443 819 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 NAA35Q5VZE5 725 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 ZNF572Q7Z3I7 529 aaPredicted RBP13.2□□□□□ -0.3
NLRC3-201ENST00000324659 ADAT2Q7Z6V5 191 aaKnown RBP13.2□□□□□ -0.3
NLRC3-201ENST00000324659 PCDHA12Q9UN75 941 aa13.2□□□□□ -0.3
NLRC3-201ENST00000324659 EP400Q96L91 3159 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 SSU72P8A0A1W2PR75 194 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 GOLGA6L10A6NI86 522 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 EDIL3O43854 480 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 SLC9A1P19634 815 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 RPS6KA1Q15418 735 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 NAB2Q15742 525 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 UBLCP1Q8WVY7 318 aaPredicted RBP13.19□□□□□ -0.3
NLRC3-201ENST00000324659 PIK3R5Q8WYR1 880 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 IQCDQ96DY2 449 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 GDF3Q9NR23 364 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 EZRP15311 586 aaKnown RBP13.19□□□□□ -0.3
NLRC3-201ENST00000324659 ZYXQ15942 572 aaKnown RBP13.19□□□□□ -0.3
NLRC3-201ENST00000324659 SLC18A3Q16572 532 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 MICALCLQ6ZW33 695 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 IQCKQ8N0W5 287 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 RNF10Q8N5U6 811 aaKnown RBP13.19□□□□□ -0.3
NLRC3-201ENST00000324659 NEDD1Q8NHV4 660 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 RTFDC1Q9BY42 306 aaPredicted RBP13.19□□□□□ -0.3
NLRC3-201ENST00000324659 TRIM6Q9C030 488 aaPredicted RBP13.19□□□□□ -0.3
NLRC3-201ENST00000324659 KCNQ5Q9NR82 932 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 USP17L15C9J2P7 530 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 USP17L13C9JLJ4 530 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 USP17L11C9JVI0 530 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 USP17L18D6R9N7 530 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 USP17L22D6RA61 530 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 USP17L17D6RBQ6 530 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 USP17L19D6RCP7 530 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 USP17L20D6RJB6 530 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 PPP1R12AO14974 1030 aaPredicted RBP13.19□□□□□ -0.3
NLRC3-201ENST00000324659 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.3
NLRC3-201ENST00000324659 PTK2Q05397 1052 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 USP17L24Q0WX57 530 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 USP17L6PQ6QN14 398 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 DNAJC19Q96DA6 116 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 SGSM3Q96HU1 749 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 RIC8AQ9NPQ8 531 aa13.19□□□□□ -0.3
NLRC3-201ENST00000324659 AKR1B1P15121 316 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 PLCG2P16885 1265 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 NR2F2P24468 414 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 CALRP27797 417 aaKnown RBP13.18□□□□□ -0.3
NLRC3-201ENST00000324659 TMOD1P28289 359 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 GCKP35557 465 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 ERVK-9P63128 1117 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 TNNC1P63316 161 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 KCNH2Q12809 1159 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 USH1GQ495M9 461 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 EGFL6Q8IUX8 553 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 DPH5Q9H2P9 285 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
NLRC3-201ENST00000324659 SCAF8Q9UPN6 1271 aaKnown RBP13.18□□□□□ -0.3
NLRC3-201ENST00000324659 SNED1Q8TER0 1413 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms