RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 KCNV1Q6PIU1 500 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 SV2BQ7L1I2 683 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 MIER3Q7Z3K6 550 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 MSL3Q8N5Y2 521 aaKnown RBP14.22□□□□□ -0.13
DDX39A-202ENST00000324340 STAMQ92783 540 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 TRIM9Q9C026 710 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 LRRC27Q9C0I9 530 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 PKD2L1Q9P0L9 805 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 MAN1B1Q9UKM7 699 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 LOXHD1Q8IVV2 1947 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 POTEFA5A3E0 1075 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 WDR64B1ANS9 1081 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 E9PMD0 336 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 DDX39AO00148 427 aaKnown RBP14.22□□□□□ -0.13
DDX39A-202ENST00000324340 RIOK3O14730 519 aaKnown RBP14.22□□□□□ -0.13
DDX39A-202ENST00000324340 AOC2O75106 756 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 LYPLA2O95372 231 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 P4HBP07237 508 aaKnown RBP14.22□□□□□ -0.13
DDX39A-202ENST00000324340 HOXC6P09630 235 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 CASP1P29466 404 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 SP2Q02086 613 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 MCM6Q14566 821 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 ANO6Q4KMQ2 910 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 POTEGQ6S5H5 508 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 SEPT14Q6ZU15 432 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 ARMCX2Q7L311 632 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 GIMAP8Q8ND71 665 aaPredicted RBP14.22□□□□□ -0.13
DDX39A-202ENST00000324340 USP6NLQ92738 828 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 DYDC2Q96IM9 177 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 CFHR5Q9BXR6 569 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 JPH1Q9HDC5 661 aaPredicted RBP14.22□□□□□ -0.13
DDX39A-202ENST00000324340 FAM53CQ9NYF3 392 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 RGL1Q9NZL6 768 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 MGAMO43451 1857 aa14.21□□□□□ -0.13
DDX39A-202ENST00000324340 DOCK5Q9H7D0 1870 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.21□□□□□ -0.14
DDX39A-202ENST00000324340 KLRC4O43908 158 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 RPN1P04843 607 aaKnown RBP14.21□□□□□ -0.14
DDX39A-202ENST00000324340 BMP6P22004 513 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 SLC12A3P55017 1021 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 CYP4A11Q02928 519 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 GRM1Q13255 1194 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 CTTNQ14247 550 aaKnown RBP14.21□□□□□ -0.14
DDX39A-202ENST00000324340 NEDD9Q14511 834 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 KCNB1Q14721 858 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 DPCR1Q3MIW9 517 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 DPP9Q86TI2 863 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 SYT2Q8N9I0 419 aaPredicted RBP14.21□□□□□ -0.14
DDX39A-202ENST00000324340 RNF214Q8ND24 703 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 FAM200AQ8TCP9 573 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 MAML3Q96JK9 1138 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 BPIFA3Q9BQP9 254 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 BLZF1Q9H2G9 400 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 SLC5A4Q9NY91 659 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 SLC9A2Q9UBY0 812 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 TCEAL9Q9UHQ7 104 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 DNM3Q9UQ16 869 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 PCDHA10Q9Y5I2 948 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 SYNGAP1Q96PV0 1343 aa14.21□□□□□ -0.14
DDX39A-202ENST00000324340 MCM3APO60318 1980 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 PVALEFA0A1B0GWK0 134 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 RBM47A0AV96 593 aaKnown RBP14.2□□□□□ -0.14
DDX39A-202ENST00000324340 MYMKA6NI61 221 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 BIN1O00499 593 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 ATG7O95352 703 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 EYA4O95677 639 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 PLA2G4BP0C869 781 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 UBA1P22314 1058 aaKnown RBP14.2□□□□□ -0.14
DDX39A-202ENST00000324340 MAP2K2P36507 400 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 PSMC6P62333 389 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 MAP2K5Q13163 448 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 IRF5Q13568 498 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 CCDC62Q6P9F0 684 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 C11orf57Q6ZUT1 292 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-202ENST00000324340 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-202ENST00000324340 TPH2Q8IWU9 490 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 KRT222Q8N1A0 295 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 MLKLQ8NB16 471 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 LXNQ9BS40 222 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 KATNBL1Q9H079 304 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 DNAJC25Q9H1X3 360 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 ZSWIM4Q9H7M6 989 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 VTA1Q9NP79 307 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 RMND1Q9NWS8 449 aa14.2□□□□□ -0.14
DDX39A-202ENST00000324340 WRAP73Q9P2S5 460 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-202ENST00000324340 WDR81Q562E7 1941 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 A0A087WWV3 80 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 TULP2O00295 520 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 FARP2O94887 1054 aaPredicted RBP14.19□□□□□ -0.14
DDX39A-202ENST00000324340 RHOBTB3O94955 611 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 SNAI1O95863 264 aaPredicted RBP14.19□□□□□ -0.14
DDX39A-202ENST00000324340 IGHA2P01877 340 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 CYP11B2P19099 503 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 QARSP47897 775 aaKnown RBP14.19□□□□□ -0.14
DDX39A-202ENST00000324340 ZNF165P49910 485 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 ACTR2P61160 394 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 TERF2Q15554 542 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 CT47A1Q5JQC4 288 aaPredicted RBP14.19□□□□□ -0.14
DDX39A-202ENST00000324340 ABHD15Q6UXT9 468 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 EEPD1Q7L9B9 569 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms