RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 PNPLA7Q6ZV29 1317 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 USP42Q9H9J4 1324 aaKnown RBP9.71□□□□□ -0.85
CD28-201ENST00000324106 PTPRUQ92729 1446 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 DIP2CQ9Y2E4 1556 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 STXBP3O00186 592 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 MEIS1O00470 390 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 TBC1D8O95759 1140 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 ACTN1P12814 892 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 CCNE1P24864 410 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 OSTNP61366 133 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 ZNF568Q3ZCX4 644 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 KLHL7Q8IXQ5 586 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 FAM76AQ8TAV0 307 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 MAP3K20Q9NYL2 800 aaKnown RBP9.71□□□□□ -0.85
CD28-201ENST00000324106 SEPT10Q9P0V9 454 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 PCDHA5Q9Y5H7 936 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 TXNP10599 105 aaKnown RBP9.71□□□□□ -0.86
CD28-201ENST00000324106 EFNA5P52803 228 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 FCGRTP55899 365 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 EZH2Q15910 746 aaKnown RBP9.71□□□□□ -0.86
CD28-201ENST00000324106 PFKFB3Q16875 520 aaPredicted RBP9.71□□□□□ -0.86
CD28-201ENST00000324106 OR6B2Q6IFH4 312 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 RASEFQ8IZ41 740 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 PARD3BQ8TEW8 1205 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 PGBD4Q96DM1 585 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 CLIC6Q96NY7 704 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 MTRQ99707 1265 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 ZNF70Q9UC06 446 aaPredicted RBP9.71□□□□□ -0.86
CD28-201ENST00000324106 LCMT1Q9UIC8 334 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 SRPRBQ9Y5M8 271 aaKnown RBP9.71□□□□□ -0.86
CD28-201ENST00000324106 STK36Q9NRP7 1315 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 GRM4Q14833 912 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 EPHA10Q5JZY3 1008 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 ZNF658Q5TYW1 1059 aaPredicted RBP9.71□□□□□ -0.86
CD28-201ENST00000324106 GPRC5AQ8NFJ5 357 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 OR6J1Q8NGC5 347 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 DAGLAQ9Y4D2 1042 aa9.71□□□□□ -0.86
CD28-201ENST00000324106 NBPF26B4DH59 902 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 EBAG9O00559 213 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 CSPG5O95196 566 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 RARBP10826 455 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 ADCY8P40145 1251 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 GTF2A2P52657 109 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 QRICH1Q2TAL8 776 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 NBPF10Q6P3W6 841 aaKnown RBP9.7□□□□□ -0.86
CD28-201ENST00000324106 LDHDQ86WU2 507 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 NBPF15Q8N660 670 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 GIMAP7Q8NHV1 300 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 ERO1AQ96HE7 468 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 HEXIM2Q96MH2 286 aaKnown RBP9.7□□□□□ -0.86
CD28-201ENST00000324106 ZNF560Q96MR9 790 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 NYAP2Q9P242 653 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 PCDHA10Q9Y5I2 948 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 SAR1BQ9Y6B6 198 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 DCCP43146 1447 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 UBN2Q6ZU65 1347 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 ZWINTO95229 277 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 C6orf222P0C671 652 aaPredicted RBP9.7□□□□□ -0.86
CD28-201ENST00000324106 USP11P51784 963 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 COPB1P53618 953 aaKnown RBP9.7□□□□□ -0.86
CD28-201ENST00000324106 SCARF1Q14162 830 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 ADCK5Q3MIX3 580 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 LRRC31Q6UY01 552 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 ZNF653Q96CK0 615 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 GLT1D1Q96MS3 346 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 XPO4Q9C0E2 1151 aaKnown RBP9.7□□□□□ -0.86
CD28-201ENST00000324106 ADARB2Q9NS39 739 aaKnown RBP9.7□□□□□ -0.86
CD28-201ENST00000324106 CROCC2H7BZ55 1655 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 PFASO15067 1338 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 FAM196BA6NMK8 535 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 MAGEB2O15479 319 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 PRPSAP2O60256 369 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 CIB2O75838 187 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 CYP2D6P10635 497 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 ZNF445P59923 1031 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 DENND2CQ68D51 928 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 PADI6Q6TGC4 694 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 DEFB132Q7Z7B7 95 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 MRPL4Q9BYD3 311 aaKnown RBP9.7□□□□□ -0.86
CD28-201ENST00000324106 MYOZ2Q9NPC6 264 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 EHD2Q9NZN4 543 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 LMTK2Q8IWU2 1503 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 IPO5O00410 1097 aaKnown RBP9.7□□□□□ -0.86
CD28-201ENST00000324106 KCNK3O14649 394 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 CTNND1O60716 968 aaKnown RBP9.7□□□□□ -0.86
CD28-201ENST00000324106 HSPA6P17066 643 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 MAPK4P31152 587 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 GTF2F1P35269 517 aaKnown RBP eCLIP9.7□□□□□ -0.86
CD28-201ENST00000324106 NR5A1Q13285 461 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 MTMR2Q13614 643 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 CTTNQ14247 550 aaKnown RBP9.7□□□□□ -0.86
CD28-201ENST00000324106 SLC10A5Q5PT55 438 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 IER5Q5VY09 327 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 TOGARAM2Q6ZUX3 1019 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 ARHGAP24Q8N264 748 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 LINC00116Q8NCU8 138 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 MRRFQ96E11 262 aaKnown RBP9.7□□□□□ -0.86
CD28-201ENST00000324106 PCIF1Q9H4Z3 704 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 BCAP29Q9UHQ4 241 aa9.7□□□□□ -0.86
CD28-201ENST00000324106 CLIC4Q9Y696 253 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms