RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 OR2W6PQ8NHA6 318 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 TBC1D16Q8TBP0 767 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 KCNV2Q8TDN2 545 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 LBHD1Q9BQE6 289 aaPredicted RBP16.61■□□□□ 0.25
VARS2-201ENST00000321897 CCPG1Q9ULG6 757 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 TACC3Q9Y6A5 838 aa16.61■□□□□ 0.25
VARS2-201ENST00000321897 F5H6K3 240 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 EIF3HO15372 352 aaKnown RBP eCLIP16.6■□□□□ 0.251e-7■□□□□ 11
VARS2-201ENST00000321897 KLRC3Q07444 240 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 NEDD1Q8NHV4 660 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 ARL8AQ96BM9 186 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 MLXIPLQ9NP71 852 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 HAUS2Q9NVX0 235 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 MTRF1LQ9UGC7 380 aaKnown RBP16.6■□□□□ 0.25
VARS2-201ENST00000321897 ENO4A6NNW6 628 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 STXBP3O00186 592 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 MEFVO15553 781 aaPredicted RBP16.6■□□□□ 0.25
VARS2-201ENST00000321897 TNNI1P19237 187 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 ARHGEF2Q92974 986 aaKnown RBP16.6■□□□□ 0.25
VARS2-201ENST00000321897 RASAL2Q9UJF2 1139 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 POLR2MP0CAP2 368 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 FAM186BQ8IYM0 893 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 ZNF668Q96K58 619 aaPredicted RBP16.6■□□□□ 0.25
VARS2-201ENST00000321897 IL17RBQ9NRM6 502 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 SPATS2LQ9NUQ6 558 aaKnown RBP16.6■□□□□ 0.25
VARS2-201ENST00000321897 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
VARS2-201ENST00000321897 DHX9Q08211 1270 aaKnown RBP16.6■□□□□ 0.25
VARS2-201ENST00000321897 ZNF211Q13398 564 aaPredicted RBP16.6■□□□□ 0.25
VARS2-201ENST00000321897 FAM83BQ5T0W9 1011 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 ZNF577Q9BSK1 485 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 KDM3AQ9Y4C1 1321 aa16.6■□□□□ 0.25
VARS2-201ENST00000321897 KCNH2Q12809 1159 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 CCDC197Q8NCU1 140 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 SPATA4Q8NEY3 305 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 ELAC2Q9BQ52 826 aaKnown RBP16.59■□□□□ 0.25
VARS2-201ENST00000321897 LAD1O00515 517 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 ZBTB5O15062 677 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 SCP2P22307 547 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 ELF1P32519 619 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 SSTR3P32745 418 aaPredicted RBP16.59■□□□□ 0.25
VARS2-201ENST00000321897 ARHGAP4P98171 946 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 CALCOCO2Q13137 446 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 SNX1Q13596 522 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 SETDB1Q15047 1291 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 DENND2CQ68D51 928 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 ALKBH5Q6P6C2 394 aaKnown RBP16.59■□□□□ 0.25
VARS2-201ENST00000321897 UNC13DQ70J99 1090 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 NLRP14Q86W24 1093 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 SPDL1Q96EA4 605 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 HOOK2Q96ED9 719 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 GEMIN8Q9NWZ8 242 aaKnown RBP16.59■□□□□ 0.25
VARS2-201ENST00000321897 UAP1Q16222 522 aaPredicted RBP16.59■□□□□ 0.25
VARS2-201ENST00000321897 CCNI2Q6ZMN8 369 aaPredicted RBP16.59■□□□□ 0.25
VARS2-201ENST00000321897 SPATS2Q86XZ4 545 aaKnown RBP16.59■□□□□ 0.25
VARS2-201ENST00000321897 PRPF38AQ8NAV1 312 aaKnown RBP16.59■□□□□ 0.25
VARS2-201ENST00000321897 RETREG2Q8NC44 543 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 IFT74Q96LB3 600 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 MTMR4Q9NYA4 1195 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 DMGDHQ9UI17 866 aaKnown RBP16.59■□□□□ 0.25
VARS2-201ENST00000321897 MAD2L2Q9UI95 211 aa16.59■□□□□ 0.25
VARS2-201ENST00000321897 IFNB1P01574 187 aa16.58■□□□□ 0.25
VARS2-201ENST00000321897 MXRA7P84157 204 aa16.58■□□□□ 0.25
VARS2-201ENST00000321897 SLC20A2Q08357 652 aa16.58■□□□□ 0.25
VARS2-201ENST00000321897 TMED8Q6PL24 325 aaPredicted RBP16.58■□□□□ 0.25
VARS2-201ENST00000321897 INTS9Q9NV88 658 aaKnown RBP16.58■□□□□ 0.25
VARS2-201ENST00000321897 PI4KBQ9UBF8 816 aa16.58■□□□□ 0.25
VARS2-201ENST00000321897 AMFRQ9UKV5 643 aa16.58■□□□□ 0.25
VARS2-201ENST00000321897 PDE4DIPQ5VU43 2346 aa16.58■□□□□ 0.24
VARS2-201ENST00000321897 TMOD1P28289 359 aa16.58■□□□□ 0.24
VARS2-201ENST00000321897 ZNF131P52739 623 aa16.58■□□□□ 0.24
VARS2-201ENST00000321897 TRIP13Q15645 432 aaPredicted RBP16.58■□□□□ 0.24
VARS2-201ENST00000321897 EMBQ6PCB8 327 aa16.58■□□□□ 0.24
VARS2-201ENST00000321897 TTC16Q8NEE8 873 aa16.58■□□□□ 0.24
VARS2-201ENST00000321897 KLHL29Q96CT2 875 aa16.58■□□□□ 0.24
VARS2-201ENST00000321897 PDHBP11177 359 aa16.58■□□□□ 0.24
VARS2-201ENST00000321897 OTUD6AQ7L8S5 288 aa16.58■□□□□ 0.24
VARS2-201ENST00000321897 HOOK3Q86VS8 718 aa16.58■□□□□ 0.24
VARS2-201ENST00000321897 NLGN1Q8N2Q7 840 aa16.58■□□□□ 0.24
VARS2-201ENST00000321897 STK17AQ9UEE5 414 aa16.58■□□□□ 0.24
VARS2-201ENST00000321897 CYTH3O43739 400 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 PLTPP55058 493 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 SEL1L2Q5TEA6 688 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 GLIS3Q8NEA6 775 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 CCT8L2Q96SF2 557 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 DDX47Q9H0S4 455 aaKnown RBP16.57■□□□□ 0.24
VARS2-201ENST00000321897 NKIRAS1Q9NYS0 192 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 NMT1P30419 496 aaKnown RBP16.57■□□□□ 0.24
VARS2-201ENST00000321897 LMNTD2Q8IXW0 634 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 NUDT12Q9BQG2 462 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 CUEDC2Q9H467 287 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 HIP1RO75146 1068 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 RAD54LQ92698 747 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 OSBPL9Q96SU4 736 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 C3P01024 1663 aa16.57■□□□□ 0.24
VARS2-201ENST00000321897 PPP1R37O75864 691 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 AFPP02771 609 aaKnown RBP16.56■□□□□ 0.24
VARS2-201ENST00000321897 CD19P15391 556 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 HDLBPQ00341 1268 aaKnown RBP16.56■□□□□ 0.24
VARS2-201ENST00000321897 SYDE2Q5VT97 1194 aa16.56■□□□□ 0.24
VARS2-201ENST00000321897 ALS2CLQ60I27 953 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms