RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 SIPA1L1O43166 1804 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 ZEB2O60315 1214 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 MARCH6O60337 910 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 MED24O75448 989 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 ANXA13P27216 316 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 PRKCIP41743 596 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 CCT5P48643 541 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 GUCY2DQ02846 1103 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 CFAP58Q5T655 872 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 KDM7AQ6ZMT4 941 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 FAM196AQ6ZSG2 479 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 SLFN12Q8IYM2 578 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 LRRC57Q8N9N7 239 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 ETNPPLQ8TBG4 499 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 CASKIN2Q8WXE0 1202 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 KRT12Q99456 494 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 ANO3Q9BYT9 981 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 EFCC1Q9HA90 598 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 BZW2Q9Y6E2 419 aaKnown RBP9.55□□□□□ -0.88
CLK1-201ENST00000321356 A0A087WUV0 522 aaPredicted RBP9.55□□□□□ -0.88
CLK1-201ENST00000321356 ESYT3A0FGR9 886 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 POTEFA5A3E0 1075 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 USP17L15C9J2P7 530 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 USP17L13C9JLJ4 530 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 USP17L11C9JVI0 530 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 USP17L18D6R9N7 530 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 USP17L22D6RA61 530 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 USP17L17D6RBQ6 530 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 USP17L19D6RCP7 530 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 USP17L20D6RJB6 530 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 EBAG9O00559 213 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 KRT14P02533 472 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 POTEIP0CG38 1075 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 UCHL3P15374 230 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 NR2F2P24468 414 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 HOXD13P35453 343 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 HSPA9P38646 679 aaKnown RBP9.55□□□□□ -0.88
CLK1-201ENST00000321356 NOP2P46087 812 aaKnown RBP9.55□□□□□ -0.88
CLK1-201ENST00000321356 CASP5P51878 434 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 TNNC1P63316 161 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 GTF2IP78347 998 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 ARID5AQ03989 594 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 PTK2Q05397 1052 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 USP17L24Q0WX57 530 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 GIT2Q14161 759 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 BMT2Q1RMZ1 405 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 USP17L6PQ6QN14 398 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 POTEGQ6S5H5 508 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 POTEEQ6S8J3 1075 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 KCTD1Q719H9 257 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 ZNF571Q7Z3V5 609 aaPredicted RBP9.55□□□□□ -0.88
CLK1-201ENST00000321356 TADA2BQ86TJ2 420 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 PACS2Q86VP3 889 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 CERS5Q8N5B7 392 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 BCAS4Q8TDM0 211 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 SCFD2Q8WU76 684 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 CCDC43Q96MW1 224 aaKnown RBP9.55□□□□□ -0.88
CLK1-201ENST00000321356 CRAMP1Q96RY5 1269 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 FBXL5Q9UKA1 691 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 HDAC9Q9UKV0 1011 aa9.55□□□□□ -0.88
CLK1-201ENST00000321356 ATXN2Q99700 1313 aaKnown RBP9.55□□□□□ -0.88
CLK1-201ENST00000321356 SHTN1A0MZ66 631 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 KLRG2A4D1S0 409 aaPredicted RBP9.54□□□□□ -0.88
CLK1-201ENST00000321356 ANKRD65E5RJM6 399 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 PDXKO00764 312 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 MEIS2O14770 477 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 TBX3O15119 743 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 RAD51CO43502 376 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 KIF4AO95239 1232 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 AFPP02771 609 aaKnown RBP9.54□□□□□ -0.88
CLK1-201ENST00000321356 PON1P27169 355 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 STAT3P40763 770 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 AP3B2Q13367 1082 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 EPHA7Q15375 998 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 RPS6KA1Q15418 735 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 KNOP1Q1ED39 458 aaKnown RBP9.54□□□□□ -0.88
CLK1-201ENST00000321356 QRICH1Q2TAL8 776 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 TTC31Q49AM3 519 aaPredicted RBP9.54□□□□□ -0.88
CLK1-201ENST00000321356 CATSPER3Q86XQ3 398 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 ACTRT1Q8TDG2 376 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 IFT81Q8WYA0 676 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 PBKQ96KB5 322 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 CALR3Q96L12 384 aaKnown RBP9.54□□□□□ -0.88
CLK1-201ENST00000321356 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLK1-201ENST00000321356 MXD3Q9BW11 206 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 COA1Q9GZY4 146 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 TAF1DQ9H5J8 278 aaPredicted RBP9.54□□□□□ -0.88
CLK1-201ENST00000321356 ARMCX3Q9UH62 379 aaPredicted RBP9.54□□□□□ -0.88
CLK1-201ENST00000321356 NAGPAQ9UK23 515 aa9.54□□□□□ -0.88
CLK1-201ENST00000321356 PACSIN2Q9UNF0 486 aaPredicted RBP9.54□□□□□ -0.88
CLK1-201ENST00000321356 C6orf229H3BNL8 230 aa9.53□□□□□ -0.88
CLK1-201ENST00000321356 SERPINB2P05120 415 aa9.53□□□□□ -0.88
CLK1-201ENST00000321356 SPATA31C1P0DKV0 1188 aa9.53□□□□□ -0.88
CLK1-201ENST00000321356 ACTN1P12814 892 aa9.53□□□□□ -0.88
CLK1-201ENST00000321356 GYS1P13807 737 aa9.53□□□□□ -0.88
CLK1-201ENST00000321356 SLC9A1P19634 815 aa9.53□□□□□ -0.88
CLK1-201ENST00000321356 RPA1P27694 616 aa9.53□□□□□ -0.88
CLK1-201ENST00000321356 ECHS1P30084 290 aa9.53□□□□□ -0.88
CLK1-201ENST00000321356 EPS15P42566 896 aa9.53□□□□□ -0.88
CLK1-201ENST00000321356 JAM2P57087 298 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms