RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DBNLQ9UJU6 430 aaKnown RBP18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 H0Y3Z8 333 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 GFAPP14136 432 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 GSPT1P15170 499 aaKnown RBP18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 PSMD2Q13200 908 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 MFSD14BQ5SR56 506 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 FAM193BQ96PV7 902 aaPredicted RBP18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 ZBTB12Q9Y330 459 aaPredicted RBP18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 BTBD18B2RXH4 712 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 CHL1O00533 1208 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 MYO1EQ12965 1108 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 KLC2Q9H0B6 622 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 MRPL28Q13084 256 aaKnown RBP18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 RUBCNQ92622 972 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 RNF26Q9BY78 433 aaPredicted RBP18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 PARD3BQ8TEW8 1205 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 NAF1Q96HR8 494 aaKnown RBP18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 PDE6BP35913 854 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 PTH1RQ03431 593 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 LRRC63Q05C16 580 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 RSRC2Q7L4I2 434 aaKnown RBP18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 ACCSQ96QU6 501 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 SNX25Q9H3E2 840 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 CPSF3Q9UKF6 684 aaKnown RBP18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 EIF4A3P38919 411 aaKnown RBP18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 HNRNPH2P55795 449 aaKnown RBP18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 FBXO11Q86XK2 927 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 SEPT9Q9UHD8 586 aaPredicted RBP18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 MAN1B1Q9UKM7 699 aa18.12■□□□□ 0.49
SMCHD1-201ENST00000320876 COPEO14579 308 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 RGS9BPQ6ZS82 235 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 NEUROG2Q9H2A3 272 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 KIAA0556O60303 1618 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 FOSP01100 380 aaPredicted RBP18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 RHOT2Q8IXI1 618 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 ELAC2Q9BQ52 826 aaKnown RBP18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 A0A1B0GW55 424 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 DUX4L2P0CJ85 424 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 DUX4L3P0CJ86 424 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 DUX4L4P0CJ87 422 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 DUX4L5P0CJ88 424 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 DUX4L6P0CJ89 424 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 DUX4L7P0CJ90 424 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 DUX4Q9UBX2 424 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 GFPT2O94808 682 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 ARL13BQ3SXY8 428 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 VPS39Q96JC1 886 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 PCDHA5Q9Y5H7 936 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 KRT38O76015 456 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 SUGCTQ9HAC7 445 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 FGGP02679 453 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 IGBP1P78318 339 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 CDC37Q16543 378 aaPredicted RBP18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 PLA2G4DQ86XP0 818 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 KIAA2013Q8IYS2 634 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 YIPF3Q9GZM5 350 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 GGCXP38435 758 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 EEF2KMTQ96G04 330 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 CDCA7Q9BWT1 371 aaPredicted RBP18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 SLC4A7Q9Y6M7 1214 aa18.11■□□□□ 0.49
SMCHD1-201ENST00000320876 SMYD4Q8IYR2 804 aaPredicted RBP18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 UBE2TQ9NPD8 197 aaPredicted RBP18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 GCFC2P16383 781 aaKnown RBP18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 ASPRV1Q53RT3 343 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 C8orf37Q96NL8 207 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 AP1M1Q9BXS5 423 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 ZBED1O96006 694 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 hCG_1984214I3L0E3 225 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 ALCAMQ13740 583 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 ZNF713Q8N859 430 aaPredicted RBP18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 KIF9Q9HAQ2 790 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 TMCC1O94876 653 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 SMARCA1P28370 1054 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 MRPS15P82914 257 aaKnown RBP18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 DRP2Q13474 957 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 TCOF1Q13428 1488 aaKnown RBP18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 FGAP02671 866 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 CAPRIN1Q14444 709 aaKnown RBP18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 TGS1Q96RS0 853 aaKnown RBP18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 ADD1P35611 737 aaKnown RBP18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 HIPK4Q8NE63 616 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 PCDHA1Q9Y5I3 950 aa18.1■□□□□ 0.49
SMCHD1-201ENST00000320876 ARL4CP56559 192 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 GOLGA8FQ08AF8 430 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 GOLGA8DPQ0D2H9 430 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 NOP9Q86U38 636 aaKnown RBP18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 PAIP2BQ9ULR5 123 aaKnown RBP18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 GMNCA6NCL1 334 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 HLA-DPA1P20036 260 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 RNF217Q8TC41 542 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 SLC24A3Q9HC58 644 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 RANBP1P43487 201 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 PSMC1P62191 440 aaKnown RBP18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 ARHGEF25Q86VW2 580 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 USP17L12C9JPN9 530 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 USP17L21D6R901 530 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 OSBPL1AQ9BXW6 950 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 ALDH1B1P30837 517 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 POLA2Q14181 598 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 CNGA3Q16281 694 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms