RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SLITRK3O94933 977 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 GNRH1P01148 92 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 ZNF286BP0CG31 522 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 SPATA31C1P0DKV0 1188 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 BEX3Q00994 111 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 IRF5Q13568 498 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 DUSP28Q4G0W2 176 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 ENGASEQ8NFI3 743 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 CCDC39Q9UFE4 941 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 PCDHA10Q9Y5I2 948 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 MORC2Q9Y6X9 1032 aaPredicted RBP17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 PGK1P00558 417 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 GH1P01241 217 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 ZNF746Q6NUN9 644 aaPredicted RBP17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 CNNM3Q8NE01 707 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 TMEM63CQ9P1W3 806 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 FAM184BQ9ULE4 1060 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 GSTTP1A0A1W2PQM5 241 aa17.25■□□□□ 0.35
PDLIM5-202ENST00000318007 MBD3O95983 291 aa17.25■□□□□ 0.35
PDLIM5-202ENST00000318007 IGHA2P01877 340 aa17.25■□□□□ 0.35
PDLIM5-202ENST00000318007 AKR1A1P14550 325 aa17.25■□□□□ 0.35
PDLIM5-202ENST00000318007 RAD51AP2Q09MP3 1159 aa17.25■□□□□ 0.35
PDLIM5-202ENST00000318007 IQSEC1Q6DN90 963 aa17.25■□□□□ 0.35
PDLIM5-202ENST00000318007 CKAP2LQ8IYA6 745 aa17.25■□□□□ 0.35
PDLIM5-202ENST00000318007 GIMAP8Q8ND71 665 aaPredicted RBP17.25■□□□□ 0.35
PDLIM5-202ENST00000318007 GPR20Q99678 358 aa17.25■□□□□ 0.35
PDLIM5-202ENST00000318007 CCSER1Q9C0I3 900 aa17.25■□□□□ 0.35
PDLIM5-202ENST00000318007 PTPN22Q9Y2R2 807 aa17.25■□□□□ 0.35
PDLIM5-202ENST00000318007 RBM47A0AV96 593 aaKnown RBP17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 PSAPP07602 524 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 C6orf222P0C671 652 aaPredicted RBP17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 JAK3P52333 1124 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 EPHA7Q15375 998 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 SLC9C1Q4G0N8 1177 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 NAALADL2Q58DX5 795 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 MIS18BP1Q6P0N0 1132 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 GLG1Q92896 1179 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 HSD17B14Q9BPX1 270 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 POLD4Q9HCU8 107 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 MYADML2A6NDP7 307 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 SUPT20HL2P0C7V6 817 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 RPA1P27694 616 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 SFNP31947 248 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 MCM6Q14566 821 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 KLHL40Q2TBA0 621 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 PLA2G4FQ68DD2 849 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 ABHD15Q6UXT9 468 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 SMAP1Q8IYB5 467 aaPredicted RBP17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 CEP57L1Q8IYX8 460 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 SLAIN1Q8ND83 568 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 BLZF1Q9H2G9 400 aa17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 GNEQ9Y223 722 aaKnown RBP17.24■□□□□ 0.35
PDLIM5-202ENST00000318007 ACTN4O43707 911 aaKnown RBP17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 P4HBP07237 508 aaKnown RBP17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 PRR29P0C7W0 189 aa17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 CTCFP49711 727 aaPredicted RBP17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 LAMC2Q13753 1193 aa17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 E2F4Q16254 413 aa17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 PDXDC2PQ6P474 469 aa17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 KRBA2Q6ZNG9 492 aa17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 IQUBQ8NA54 791 aa17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 SEPT1Q8WYJ6 367 aa17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 PCYT2Q99447 389 aa17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 ZNF302Q9NR11 478 aa17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 KDM3AQ9Y4C1 1321 aa17.23■□□□□ 0.35
PDLIM5-202ENST00000318007 SEPT4O43236 478 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 ZNF862O60290 1169 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 QARSP47897 775 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 PNOCQ13519 176 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 MTFR1Q15390 333 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 TRMT44Q8IYL2 757 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 PXYLP1Q8TE99 480 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 BHMT2Q9H2M3 363 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 MMP3P08254 477 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 RARBP10826 455 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 PTMSP20962 102 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 PRKCEQ02156 737 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 ISM2Q6H9L7 571 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 MAEAQ7L5Y9 396 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 LARP4BQ92615 738 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 NUP62CLQ9H1M0 184 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 TNMDQ9H2S6 317 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 AZI2Q9H6S1 392 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 BLOC1S4Q9NUP1 217 aa17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 SEPT9Q9UHD8 586 aaPredicted RBP17.22■□□□□ 0.35
PDLIM5-202ENST00000318007 SYNRGQ9UMZ2 1314 aa17.21■□□□□ 0.35
PDLIM5-202ENST00000318007 YWHABP31946 246 aaKnown RBP17.21■□□□□ 0.35
PDLIM5-202ENST00000318007 TMEM119Q4V9L6 283 aa17.21■□□□□ 0.35
PDLIM5-202ENST00000318007 PPTC7Q8NI37 304 aa17.21■□□□□ 0.35
PDLIM5-202ENST00000318007 MTRQ99707 1265 aa17.21■□□□□ 0.35
PDLIM5-202ENST00000318007 POLR3CQ9BUI4 534 aaPredicted RBP17.21■□□□□ 0.35
PDLIM5-202ENST00000318007 NT5C3AQ9H0P0 336 aa17.21■□□□□ 0.35
PDLIM5-202ENST00000318007 AP5M1Q9H0R1 490 aa17.21■□□□□ 0.35
PDLIM5-202ENST00000318007 ZSWIM4Q9H7M6 989 aa17.21■□□□□ 0.35
PDLIM5-202ENST00000318007 XPNPEP3Q9NQH7 507 aa17.21■□□□□ 0.35
PDLIM5-202ENST00000318007 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 FAM237AA0A1B0GTK4 181 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 MYL3P08590 195 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 STAT5BP51692 787 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms