RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 NOL9Q5SY16 702 aaKnown RBP14.44□□□□□ -0.1
CPNE1-201ENST00000317677 REPS2Q8NFH8 660 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 IL31RAQ8NI17 732 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 C12orf42Q96LP6 360 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 FAM20AQ96MK3 541 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 VPS18Q9P253 973 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 ABT1Q9ULW3 272 aaKnown RBP14.44□□□□□ -0.1
CPNE1-201ENST00000317677 KIAA1024Q9UPX6 916 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 ZHX2Q9Y6X8 837 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 POTEFA5A3E0 1075 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 ADM5C9JUS6 153 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 ALAS1P13196 640 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 CALRP27797 417 aaKnown RBP14.43□□□□□ -0.1
CPNE1-201ENST00000317677 USP14P54578 494 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 HMGCS2P54868 508 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 AMPD3Q01432 767 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 GOLGA8FQ08AF8 430 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 GOLGA8DPQ0D2H9 430 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 TBX2Q13207 712 aaPredicted RBP14.43□□□□□ -0.1
CPNE1-201ENST00000317677 SEMA3FQ13275 785 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 NCAPH2Q6IBW4 605 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 TTI2Q6NXR4 508 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 POTEGQ6S5H5 508 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 POTEEQ6S8J3 1075 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 UNC13DQ70J99 1090 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 CATSPER3Q86XQ3 398 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 DUSP9Q99956 384 aaKnown RBP14.43□□□□□ -0.1
CPNE1-201ENST00000317677 PICK1Q9NRD5 415 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 ADD3Q9UEY8 706 aaKnown RBP14.43□□□□□ -0.1
CPNE1-201ENST00000317677 RAB21Q9UL25 225 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 KDM3AQ9Y4C1 1321 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 GOLGA6L9A6NEM1 432 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 ZSCAN12O43309 604 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 PSMD10O75832 226 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 ARP10275 920 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 ZNF76P36508 570 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 PBX1P40424 430 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 PSMC6P62333 389 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 BEND6Q5SZJ8 279 aaPredicted RBP14.43□□□□□ -0.1
CPNE1-201ENST00000317677 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.43□□□□□ -0.1
CPNE1-201ENST00000317677 GLIS3Q8NEA6 775 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 FAM71BQ8TC56 605 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 DDX12PQ92771 950 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 GOLGA1Q92805 767 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 SLC5A5Q92911 643 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 AS3MTQ9HBK9 375 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 EXOC1Q9NV70 894 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 RIPK3Q9Y572 518 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 MRFAP1Q9Y605 127 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 LOC285556D6RIA3 1793 aa14.43□□□□□ -0.1
CPNE1-201ENST00000317677 VWA5AO00534 786 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 KRT31Q15323 416 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 SLC39A2Q9NP94 309 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 HOMER2Q9NSB8 354 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 LIMA1Q9UHB6 759 aaKnown RBP14.42□□□□□ -0.1
CPNE1-201ENST00000317677 AFG3L2Q9Y4W6 797 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 SNCAIPQ9Y6H5 919 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 NPHP3-ACAD11A0A0J9YXS1 232 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 PVALEFA0A1B0GWK0 134 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 TRAF5O00463 557 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 MEIS1O00470 390 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 FANCGO15287 622 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 SLC26A4O43511 780 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 TUBBP07437 444 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 PLA2G4BP0C869 781 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 SLC12A3P55017 1021 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 PPP2R3AQ06190 1150 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 DEFB115Q30KQ5 88 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 COBLL1Q53SF7 1204 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 ARSHQ5FYA8 562 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 SYTL5Q8TDW5 730 aaPredicted RBP14.42□□□□□ -0.1
CPNE1-201ENST00000317677 CNKSR2Q8WXI2 1034 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 DCPSQ96C86 337 aaKnown RBP14.42□□□□□ -0.1
CPNE1-201ENST00000317677 NT5C3AQ9H0P0 336 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 PDE11AQ9HCR9 933 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 L1RE1Q9UN81 338 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 ADAMTS5Q9UNA0 930 aa14.42□□□□□ -0.1
CPNE1-201ENST00000317677 LCTP09848 1927 aa14.41□□□□□ -0.1
CPNE1-201ENST00000317677 FRMPD4Q14CM0 1322 aa14.41□□□□□ -0.1
CPNE1-201ENST00000317677 ITGB5P18084 799 aa14.41□□□□□ -0.1
CPNE1-201ENST00000317677 CYP11B2P19099 503 aa14.41□□□□□ -0.1
CPNE1-201ENST00000317677 RPA1P27694 616 aa14.41□□□□□ -0.1
CPNE1-201ENST00000317677 HNRNPH1P31943 449 aaKnown RBP14.41□□□□□ -0.1
CPNE1-201ENST00000317677 SUPT20HL1Q3ZLR7 823 aa14.41□□□□□ -0.1
CPNE1-201ENST00000317677 CEP55Q53EZ4 464 aa14.41□□□□□ -0.1
CPNE1-201ENST00000317677 B3GNT9Q6UX72 402 aa14.41□□□□□ -0.1
CPNE1-201ENST00000317677 OTOP1Q7RTM1 612 aa14.41□□□□□ -0.1
CPNE1-201ENST00000317677 DHTKD1Q96HY7 919 aaPredicted RBP14.41□□□□□ -0.1
CPNE1-201ENST00000317677 PURBQ96QR8 312 aaKnown RBP14.41□□□□□ -0.1
CPNE1-201ENST00000317677 FGFBP2Q9BYJ0 223 aa14.41□□□□□ -0.1
CPNE1-201ENST00000317677 SEMA6BQ9H3T3 888 aa14.41□□□□□ -0.1
CPNE1-201ENST00000317677 LRRC10BA6NIK2 292 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 RASSF10A6NK89 507 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 NKRFO15226 690 aaKnown RBP eCLIP14.4□□□□□ -0.1
CPNE1-201ENST00000317677 CCNE1P24864 410 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 VGLL4Q14135 290 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 TCP11X2Q5H9J9 407 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 ANKRD40Q6AI12 368 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 P2RX5Q93086 422 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 TAAR1Q96RJ0 339 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms