RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ARFGAP2Q8N6H7 521 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 CCT8L2Q96SF2 557 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 KANSL2Q9H9L4 492 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 JMJD4Q9H9V9 463 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 GAKO14976 1311 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 E9PMD0 336 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 FAM107AO95990 144 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 CYP11B2P19099 503 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 ANXA13P27216 316 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 HSD17B3P37058 310 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 USP8P40818 1118 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 RNASE9P60153 205 aaKnown RBP20.93■□□□□ 0.94
RTN4-201ENST00000317610 NFIXQ14938 502 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 ZNF571Q7Z3V5 609 aaPredicted RBP20.93■□□□□ 0.94
RTN4-201ENST00000317610 PLCD3Q8N3E9 789 aa20.93■□□□□ 0.94
RTN4-201ENST00000317610 NAP1L4Q99733 375 aaKnown RBP20.93■□□□□ 0.94
RTN4-201ENST00000317610 PITPNM2Q9BZ72 1349 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 CETN3O15182 167 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 UAP1Q16222 522 aaPredicted RBP20.92■□□□□ 0.94
RTN4-201ENST00000317610 HERC4Q5GLZ8 1057 aaPredicted RBP20.92■□□□□ 0.94
RTN4-201ENST00000317610 MAATS1Q7Z4T9 603 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 CUL5Q93034 780 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 LRRC45Q96CN5 670 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 KIAA1024Q9UPX6 916 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 CAPN7Q9Y6W3 813 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 SSBP05455 408 aaKnown RBP eCLIP20.92■□□□□ 0.94
RTN4-201ENST00000317610 PRKCIP41743 596 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 EPS15P42566 896 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 FRMD5Q7Z6J6 570 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 GPBP1Q86WP2 473 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 LRRC47Q8N1G4 583 aaKnown RBP20.92■□□□□ 0.94
RTN4-201ENST00000317610 GJA10Q969M2 543 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 CD209Q9NNX6 404 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 SWAP70Q9UH65 585 aa20.92■□□□□ 0.94
RTN4-201ENST00000317610 GOLGA6L10A6NI86 522 aa20.91■□□□□ 0.94
RTN4-201ENST00000317610 IL1R1P14778 569 aa20.91■□□□□ 0.94
RTN4-201ENST00000317610 GABPAQ06546 454 aa20.91■□□□□ 0.94
RTN4-201ENST00000317610 ZNF543Q08ER8 600 aa20.91■□□□□ 0.94
RTN4-201ENST00000317610 C3orf20Q8ND61 904 aa20.91■□□□□ 0.94
RTN4-201ENST00000317610 POLD4Q9HCU8 107 aa20.91■□□□□ 0.94
RTN4-201ENST00000317610 GPCPD1Q9NPB8 672 aa20.91■□□□□ 0.94
RTN4-201ENST00000317610 NAGPAQ9UK23 515 aa20.91■□□□□ 0.94
RTN4-201ENST00000317610 HDAC9Q9UKV0 1011 aa20.91■□□□□ 0.94
RTN4-201ENST00000317610 ATF5Q9Y2D1 282 aaPredicted RBP20.91■□□□□ 0.94
RTN4-201ENST00000317610 NPHP3-ACAD11A0A0J9YXS1 232 aa20.9■□□□□ 0.94
RTN4-201ENST00000317610 MRPL12P52815 198 aaKnown RBP20.9■□□□□ 0.94
RTN4-201ENST00000317610 C6orf89Q6UWU4 347 aa20.9■□□□□ 0.94
RTN4-201ENST00000317610 SLFN11Q7Z7L1 901 aa20.9■□□□□ 0.94
RTN4-201ENST00000317610 ADGRF4Q8IZF3 695 aa20.9■□□□□ 0.94
RTN4-201ENST00000317610 GPR101Q96P66 508 aaPredicted RBP20.9■□□□□ 0.94
RTN4-201ENST00000317610 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.9■□□□□ 0.947e-8■■□□□ 13.4
RTN4-201ENST00000317610 TRAF3IP3Q9Y228 551 aa20.9■□□□□ 0.94
RTN4-201ENST00000317610 CCDC188H7C350 402 aa20.9■□□□□ 0.94
RTN4-201ENST00000317610 GCOM1H8Y6P7 765 aaPredicted RBP20.9■□□□□ 0.94
RTN4-201ENST00000317610 PGRMC1O00264 195 aaKnown RBP20.9■□□□□ 0.94
RTN4-201ENST00000317610 MYZAPP0CAP1 466 aa20.9■□□□□ 0.94
RTN4-201ENST00000317610 UCHL3P15374 230 aa20.9■□□□□ 0.94
RTN4-201ENST00000317610 SEC24CP53992 1094 aa20.9■□□□□ 0.94
RTN4-201ENST00000317610 HDLBPQ00341 1268 aaKnown RBP20.9■□□□□ 0.94
RTN4-201ENST00000317610 HLTFQ14527 1009 aaKnown RBP eCLIP20.9■□□□□ 0.941e-8■■□□□ 13
RTN4-201ENST00000317610 ENOX2Q16206 610 aaKnown RBP20.9■□□□□ 0.94
RTN4-201ENST00000317610 TPCN2Q8NHX9 752 aa20.9■□□□□ 0.94
RTN4-201ENST00000317610 CEP104O60308 925 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 MARCH6O60337 910 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 ACTN1P12814 892 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 NR2F2P24468 414 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 SLC12A3P55017 1021 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 ZNF844Q08AG5 666 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 BIRC3Q13489 604 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 ARSHQ5FYA8 562 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 SLF2Q8IX21 1173 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 RASGEF1CQ8N431 466 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 KCNMB3Q9NPA1 279 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 SLC12A6Q9UHW9 1150 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 FBXL5Q9UKA1 691 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 STXBP5LQ9Y2K9 1186 aa20.89■□□□□ 0.94
RTN4-201ENST00000317610 A0A0A6YYK5 440 aaPredicted RBP20.89■□□□□ 0.93
RTN4-201ENST00000317610 POTEB3A0JP26 581 aa20.89■□□□□ 0.93
RTN4-201ENST00000317610 POTECB2RU33 542 aa20.89■□□□□ 0.93
RTN4-201ENST00000317610 SLC9A1P19634 815 aa20.89■□□□□ 0.93
RTN4-201ENST00000317610 CACNB1Q02641 598 aaPredicted RBP20.89■□□□□ 0.93
RTN4-201ENST00000317610 POTEBQ6S5H4 581 aa20.89■□□□□ 0.93
RTN4-201ENST00000317610 METTL13Q8N6R0 699 aa20.89■□□□□ 0.93
RTN4-201ENST00000317610 NOC2LQ9Y3T9 749 aaKnown RBP20.89■□□□□ 0.93
RTN4-201ENST00000317610 SART1O43290 800 aaKnown RBP20.88■□□□□ 0.93
RTN4-201ENST00000317610 AFPP02771 609 aaKnown RBP20.88■□□□□ 0.93
RTN4-201ENST00000317610 AKR1B1P15121 316 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 PLCB4Q15147 1175 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 ALKBH5Q6P6C2 394 aaKnown RBP20.88■□□□□ 0.93
RTN4-201ENST00000317610 SEC14L1Q92503 715 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 NEUROG2Q9H2A3 272 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 PON1P27169 355 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 DRP2Q13474 957 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 AGBL2Q5U5Z8 902 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 RUFY4Q6ZNE9 571 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 RBM46Q8TBY0 533 aaKnown RBP20.88■□□□□ 0.93
RTN4-201ENST00000317610 CABS1Q96KC9 395 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 MBOAT7Q96N66 472 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 SPAG5Q96R06 1193 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 DHX36Q9H2U1 1008 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms