RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 USP17L15C9J2P7 530 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 USP17L13C9JLJ4 530 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 USP17L11C9JVI0 530 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 USP17L18D6R9N7 530 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 USP17L22D6RA61 530 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 USP17L17D6RBQ6 530 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 USP17L19D6RCP7 530 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 USP17L20D6RJB6 530 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 USP17L24Q0WX57 530 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 COASYQ13057 564 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 ALCAMQ13740 583 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 E4F1Q66K89 784 aaPredicted RBP14.91□□□□□ -0.02
SPAST-201ENST00000315285 USP17L6PQ6QN14 398 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 DCAF4Q8WV16 495 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 FAM84BQ96KN1 310 aaPredicted RBP14.91□□□□□ -0.02
SPAST-201ENST00000315285 MRPL47Q9HD33 250 aaKnown RBP14.91□□□□□ -0.02
SPAST-201ENST00000315285 TMEM260Q9NX78 707 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 EIF3BP55884 814 aaKnown RBP14.91□□□□□ -0.02
SPAST-201ENST00000315285 RHOT2Q8IXI1 618 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 PIGOQ8TEQ8 1089 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 WDR24Q96S15 920 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 PCDHA6Q9UN73 950 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 PCDHA8Q9Y5H6 950 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 NCOA3Q9Y6Q9 1424 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 M0QZ92 97 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 GFPT1Q06210 699 aaPredicted RBP14.91□□□□□ -0.02
SPAST-201ENST00000315285 ADCY1Q08828 1119 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 MTF1Q14872 753 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 FAM160B2Q86V87 743 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 MROH7-TTC4A0A0A0MT08 1334 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 KCNJ6P48051 423 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 USP14P54578 494 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 PSMD6Q15008 389 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 MUM1Q2TAK8 710 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 FAM83BQ5T0W9 1011 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 MICAL1Q8TDZ2 1067 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 NSMCE1Q8WV22 266 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 MAD1L1Q9Y6D9 718 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 A0A1W2PQC6 194 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 TXNDC9O14530 226 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 RASGRF2O14827 1237 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 SEMA3FQ13275 785 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 TBC1D9BQ66K14 1250 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 PPP1R2P3Q6NXS1 205 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 PPP1R18Q6NYC8 613 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 GUF1Q8N442 669 aaKnown RBP14.9□□□□□ -0.02
SPAST-201ENST00000315285 CDHR1Q96JP9 859 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 RIOK1Q9BRS2 568 aaKnown RBP14.9□□□□□ -0.02
SPAST-201ENST00000315285 CAPN9O14815 690 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 GH2P01242 217 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 NR3C1P04150 777 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 NPR1P16066 1061 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 CACNB3P54284 484 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 KCNH2Q12809 1159 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 PHLDB3Q6NSJ2 640 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 RINT1Q6NUQ1 792 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 GADL1Q6ZQY3 521 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 HACE1Q8IYU2 909 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 DNAJC12Q9UKB3 198 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 INHBAP08476 426 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 TFDP1Q14186 410 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 RFX6Q8HWS3 928 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 SRBD1Q8N5C6 995 aaKnown RBP14.9□□□□□ -0.02
SPAST-201ENST00000315285 ZMYND12Q9H0C1 365 aa14.9□□□□□ -0.02
SPAST-201ENST00000315285 ARHGAP42A6NI28 874 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 EIF3CLB5ME19 914 aaKnown RBP14.89□□□□□ -0.03
SPAST-201ENST00000315285 EIF3CQ99613 913 aaKnown RBP14.89□□□□□ -0.03
SPAST-201ENST00000315285 HDAC6Q9UBN7 1215 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 IQGAP1P46940 1657 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 POTEB3A0JP26 581 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 POTECB2RU33 542 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 USP17L10C9JJH3 530 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 GOLGA8SH3BPF8 625 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 RAD17O75943 681 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 KRT1P04264 644 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 ANTXR2P58335 489 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 IGBP1P78318 339 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 MIS18BP1Q6P0N0 1132 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 POTEBQ6S5H4 581 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 ARHGEF18Q6ZSZ5 1173 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 CD2APQ9Y5K6 639 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 MORC2Q9Y6X9 1032 aaPredicted RBP14.89□□□□□ -0.03
SPAST-201ENST00000315285 GOLGA8IPA6NC78 632 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 GOLGA8JA6NMD2 632 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 INO80B-WBP1J3KQ70 363 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 FMR1Q06787 632 aaKnown RBP eCLIP14.89□□□□□ -0.03
SPAST-201ENST00000315285 INO80BQ9C086 356 aaPredicted RBP14.89□□□□□ -0.03
SPAST-201ENST00000315285 QTRT2Q9H974 415 aaKnown RBP14.89□□□□□ -0.03
SPAST-201ENST00000315285 TUBE1Q9UJT0 475 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 FAM205CA6NFA0 338 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 FDPSP14324 419 aaKnown RBP14.89□□□□□ -0.03
SPAST-201ENST00000315285 EIF2AK2P19525 551 aaKnown RBP14.89□□□□□ -0.03
SPAST-201ENST00000315285 BAG6P46379 1132 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 DNAJC24Q6P3W2 148 aa14.89□□□□□ -0.03
SPAST-201ENST00000315285 A0A1B0GTH6 734 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 TADA3O75528 432 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 ABCD1P33897 745 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 RFX5P48382 616 aaPredicted RBP14.88□□□□□ -0.03
SPAST-201ENST00000315285 PPP2R5CQ13362 524 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 KCNB1Q14721 858 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms