RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 ZHX3Q9H4I2 956 aa18.57■□□□□ 0.56
CLCF1-201ENST00000312438 RRAGCQ9HB90 399 aa18.57■□□□□ 0.56
CLCF1-201ENST00000312438 WRAP73Q9P2S5 460 aaPredicted RBP18.57■□□□□ 0.56
CLCF1-201ENST00000312438 COL4A3BPQ9Y5P4 624 aa18.57■□□□□ 0.56
CLCF1-201ENST00000312438 SKILP12757 684 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 COPB2P35606 906 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 GJA5P36382 358 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 STXBP2Q15833 593 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 GNPTABQ3T906 1256 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 TSG101Q99816 390 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 PAGR1Q9BTK6 254 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 RUSC1Q9BVN2 902 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 MOV10L1Q9BXT6 1211 aaKnown RBP18.56■□□□□ 0.56
CLCF1-201ENST00000312438 TBC1D7Q9P0N9 293 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 ZBTB39O15060 712 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 NRDCO43847 1150 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 PEX10O60683 326 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 CNMDO75829 334 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 LYPLA2O95372 231 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 PBX1P40424 430 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 QARSP47897 775 aaKnown RBP18.56■□□□□ 0.56
CLCF1-201ENST00000312438 RDM1Q8NG50 284 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 SENP7Q9BQF6 1050 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 VPS16Q9H269 839 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 RBPJLQ9UBG7 517 aa18.56■□□□□ 0.56
CLCF1-201ENST00000312438 WDR64B1ANS9 1081 aa18.55■□□□□ 0.56
CLCF1-201ENST00000312438 TBCAO75347 108 aaKnown RBP18.55■□□□□ 0.56
CLCF1-201ENST00000312438 EIF3JO75822 258 aaKnown RBP18.55■□□□□ 0.56
CLCF1-201ENST00000312438 RGS20O76081 388 aa18.55■□□□□ 0.56
CLCF1-201ENST00000312438 GAP43P17677 238 aa18.55■□□□□ 0.56
CLCF1-201ENST00000312438 ZNF746Q6NUN9 644 aaPredicted RBP18.55■□□□□ 0.56
CLCF1-201ENST00000312438 GLIS3Q8NEA6 775 aa18.55■□□□□ 0.56
CLCF1-201ENST00000312438 TAB2Q9NYJ8 693 aa18.55■□□□□ 0.56
CLCF1-201ENST00000312438 SPATA31C2B4DYI2 1134 aa18.54■□□□□ 0.56
CLCF1-201ENST00000312438 TPM2P07951 284 aa18.54■□□□□ 0.56
CLCF1-201ENST00000312438 ERCC3P19447 782 aa18.54■□□□□ 0.56
CLCF1-201ENST00000312438 CCZ1BP86790 482 aa18.54■□□□□ 0.56
CLCF1-201ENST00000312438 CCZ1P86791 482 aaPredicted RBP18.54■□□□□ 0.56
CLCF1-201ENST00000312438 CNTN2Q02246 1040 aa18.54■□□□□ 0.56
CLCF1-201ENST00000312438 PTPN21Q16825 1174 aa18.54■□□□□ 0.56
CLCF1-201ENST00000312438 SCFD1Q8WVM8 642 aa18.54■□□□□ 0.56
CLCF1-201ENST00000312438 DBR1Q9UK59 544 aaKnown RBP18.54■□□□□ 0.56
CLCF1-201ENST00000312438 OTOFQ9HC10 1997 aa18.54■□□□□ 0.56
CLCF1-201ENST00000312438 SRCAPQ6ZRS2 3230 aa18.54■□□□□ 0.56
CLCF1-201ENST00000312438 ARHGEF35A5YM69 484 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 POTEB2H3BUK9 544 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 KCNA2P16389 499 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 PSMC5P62195 406 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.53■□□□□ 0.56
CLCF1-201ENST00000312438 SFR1Q86XK3 245 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 C4orf19Q8IY42 314 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 GBA2Q9HCG7 927 aaPredicted RBP18.53■□□□□ 0.56
CLCF1-201ENST00000312438 TXNRD2Q9NNW7 524 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 SPTLC3Q9NUV7 552 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 PNMA3Q9UL41 463 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 PCDHA10Q9Y5I2 948 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 NFASCO94856 1347 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 B4DLN1 442 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 CCNE2O96020 404 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 CETPP11597 493 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 GUCY2CP25092 1073 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 ALDH5A1P51649 535 aaPredicted RBP18.53■□□□□ 0.56
CLCF1-201ENST00000312438 GTF2A2P52657 109 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 FKBP3Q00688 224 aaKnown RBP18.53■□□□□ 0.56
CLCF1-201ENST00000312438 Q3C1V9 767 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 ITIH6Q6UXX5 1313 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 SMAP1Q8IYB5 467 aaPredicted RBP18.53■□□□□ 0.56
CLCF1-201ENST00000312438 C2orf69Q8N8R5 385 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 CCDC112Q8NEF3 446 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 GTF3C2Q8WUA4 911 aaPredicted RBP18.53■□□□□ 0.56
CLCF1-201ENST00000312438 CNOT6LQ96LI5 555 aaKnown RBP18.53■□□□□ 0.56
CLCF1-201ENST00000312438 TUBGCP2Q9BSJ2 902 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 FGFBP2Q9BYJ0 223 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 OLFML3Q9NRN5 406 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 ODF2LQ9ULJ1 636 aa18.53■□□□□ 0.56
CLCF1-201ENST00000312438 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.53■□□□□ 0.56
CLCF1-201ENST00000312438 FAM13AO94988 1023 aa18.52■□□□□ 0.56
CLCF1-201ENST00000312438 ICAM3P32942 547 aa18.52■□□□□ 0.56
CLCF1-201ENST00000312438 UBXN1Q04323 297 aa18.52■□□□□ 0.56
CLCF1-201ENST00000312438 ZCWPW2Q504Y3 356 aa18.52■□□□□ 0.56
CLCF1-201ENST00000312438 PPFIBP1Q86W92 1011 aa18.52■□□□□ 0.56
CLCF1-201ENST00000312438 SEL1LQ9UBV2 794 aa18.52■□□□□ 0.56
CLCF1-201ENST00000312438 LGALS16A8MUM7 142 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 RSPH10B2B2RC85 870 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 RSPH10BP0C881 870 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 DNM2P50570 870 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 PPP4R3CPQ6ZMV5 832 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 EPM2AIP1Q7L775 607 aaPredicted RBP18.51■□□□□ 0.55
CLCF1-201ENST00000312438 MYCT1Q8N699 235 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 FAM133AQ8N9E0 248 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 EEF2KMTQ96G04 330 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 KCTD10Q9H3F6 313 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 TMX1Q9H3N1 280 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 MROH8Q9H579 483 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 MRPL44Q9H9J2 332 aaKnown RBP18.51■□□□□ 0.55
CLCF1-201ENST00000312438 PARVGQ9HBI0 331 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 SLC45A1Q9Y2W3 748 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 COL11A1P12107 1806 aaPredicted RBP18.51■□□□□ 0.55
CLCF1-201ENST00000312438 LOC285556D6RIA3 1793 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 SOWAHBA6NEL2 793 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms