RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 PARP9Q8IXQ6 854 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 PNMA5Q96PV4 448 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 CNOT8Q9UFF9 292 aaKnown RBP15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 PNMA2Q9UL42 364 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 BCS1LQ9Y276 419 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 KCNH2Q12809 1159 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 MEI1Q5TIA1 1274 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 GJB7Q6PEY0 223 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 LRRC55Q6ZSA7 311 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 RAPGEF5Q92565 580 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 PCDHB13Q9Y5F0 798 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 SHANK3Q9BYB0 1731 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 SSU72P8A0A1W2PR75 194 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 PGRMC1O00264 195 aaKnown RBP15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 KIF4AO95239 1232 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 HNRNPH3P31942 346 aaKnown RBP15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 PLTPP55058 493 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 RPS8P62241 208 aaKnown RBP15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 PPP2R2AP63151 447 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 GPBP1Q86WP2 473 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 DYDC1Q8WWB3 177 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 OSBPL7Q9BZF2 842 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 MAGEF1Q9HAY2 307 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 SLC24A3Q9HC58 644 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 LEMD3Q9Y2U8 911 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 BCL9O00512 1426 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 FGGP02679 453 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 RXRBP28702 533 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 SLC16A2P36021 539 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 PRPHP41219 470 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 C12orf60Q5U649 245 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 TBC1D1Q86TI0 1168 aaPredicted RBP15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 METTL13Q8N6R0 699 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 RAD54LQ92698 747 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 INPP4AQ96PE3 977 aaPredicted RBP15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 LRRC4CQ9HCJ2 640 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 RNF14Q9UBS8 474 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 UTP11Q9Y3A2 253 aaKnown RBP15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 ONECUT3O60422 494 aaPredicted RBP15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 TACO1Q9BSH4 297 aaKnown RBP15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 VEZTQ9HBM0 779 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 MLXIPLQ9NP71 852 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 CLIC2O15247 247 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 SKAP2O75563 359 aaPredicted RBP15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 CAMTA2O94983 1202 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 ADCY1Q08828 1119 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 CCDC38Q502W7 563 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 HVCN1Q96D96 273 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 PCDHA12Q9UN75 941 aa15.71■□□□□ 0.11
SCUBE2-201ENST00000309263 NUP188Q5SRE5 1749 aa15.71■□□□□ 0.1
SCUBE2-201ENST00000309263 GLI3P10071 1580 aa15.71■□□□□ 0.1
SCUBE2-201ENST00000309263 COL1A1P02452 1464 aaPredicted RBP15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 PJA2O43164 708 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 NEBLO76041 1014 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 NOL4O94818 638 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 SMTNP53814 917 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 UAP1Q16222 522 aaPredicted RBP15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 ECM1Q16610 540 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 KRT27Q7Z3Y8 459 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 ZMYND12Q9H0C1 365 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 ZNF652Q9Y2D9 606 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 LOC102724428A0A0B4J2F2 783 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 POTEB3A0JP26 581 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 SPDYE3A6NKU9 549 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 POTECB2RU33 542 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 CETN3O15182 167 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 SIK1P57059 783 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 POTEBQ6S5H4 581 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 IQCDQ96DY2 449 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 CEP95Q96GE4 821 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 ISCUQ9H1K1 167 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 CHORDC1Q9UHD1 332 aaPredicted RBP15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 MPHOSPH10O00566 681 aaKnown RBP15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 GFPT2O94808 682 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 CDC25CP30307 473 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 ELF1P32519 619 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 STAT3P40763 770 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 ADCY7P51828 1080 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 GRIK5Q16478 980 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 GLG1Q92896 1179 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 EMILIN3Q9NT22 766 aa15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 BSDC1Q9NW68 430 aaPredicted RBP15.7■□□□□ 0.1
SCUBE2-201ENST00000309263 BAG3O95817 575 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 ASTE1Q2TB18 679 aaPredicted RBP15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 INTS5Q6P9B9 1019 aaKnown RBP15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 ZNF571Q7Z3V5 609 aaPredicted RBP15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 FUKQ8N0W3 1084 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 ELAC2Q9BQ52 826 aaKnown RBP15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 SNX24Q9Y343 169 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 M0R2N6 131 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 GALNT17Q6IS24 598 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 CCDC26Q8TAB7 109 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 THOC1Q96FV9 657 aaKnown RBP15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 DDX25Q9UHL0 483 aaKnown RBP15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 TPX2Q9ULW0 747 aaKnown RBP15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 ZNF804BA4D1E1 1349 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 WNK3Q9BYP7 1800 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 PVALEFA0A1B0GWK0 134 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 SFI1A8K8P3 1242 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms