RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CCDC197Q8NCU1 140 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 KIAA1024Q9UPX6 916 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 COL1A1P02452 1464 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-201ENST00000309017 PALM3A6NDB9 673 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-201ENST00000309017 BUB1BO60566 1050 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-201ENST00000309017 ABCB4P21439 1286 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 FLT3P36888 993 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 SCTRP47872 440 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 ANKRD20A8PQ5CZ79 823 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 OSBPL7Q9BZF2 842 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 NEUROG2Q9H2A3 272 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 SAMD15Q9P1V8 674 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 NPHP3-ACAD11A0A0J9YXS1 232 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 E9PMD0 336 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 DNM1LO00429 736 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 PPP1R12BO60237 982 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-201ENST00000309017 NOL4O94818 638 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 SLC9A1P19634 815 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 SCP2P22307 547 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 IFNAR2P48551 515 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 UBE2SQ16763 222 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 HOOK3Q86VS8 718 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 SYN2Q92777 582 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-201ENST00000309017 FMO2Q99518 471 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 TRIM51Q9BSJ1 452 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 ARMCX3Q9UH62 379 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-201ENST00000309017 HDAC9Q9UKV0 1011 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 PNMA2Q9UL42 364 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 PCDHA12Q9UN75 941 aa12.17□□□□□ -0.46
PTPN7-201ENST00000309017 A0A1B0GUA9 196 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 DCDC2CA8MYV0 355 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 OPLAHO14841 1288 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 FGGP02679 453 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 UAP1Q16222 522 aaPredicted RBP12.16□□□□□ -0.46
PTPN7-201ENST00000309017 EXOC3L4Q17RC7 722 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 CNOT8Q9UFF9 292 aaKnown RBP12.16□□□□□ -0.46
PTPN7-201ENST00000309017 TPX2Q9ULW0 747 aaKnown RBP12.16□□□□□ -0.46
PTPN7-201ENST00000309017 UBR2Q8IWV8 1755 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 GOLGA6L10A0A0M3HER8 536 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 CCDC188H7C350 402 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 RBAK-RBAKDNI3L0D1 243 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 RASSF9O75901 435 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 SLC8A1P32418 973 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 PREPLQ4J6C6 727 aaPredicted RBP12.16□□□□□ -0.46
PTPN7-201ENST00000309017 ARMC9Q7Z3E5 817 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 FBXO33Q7Z6M2 555 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 TEX2Q8IWB9 1127 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 KIRREL3Q8IZU9 778 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTPN7-201ENST00000309017 NLRP3Q96P20 1036 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 SPZ1Q9BXG8 430 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 DONSONQ9NYP3 566 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 DDX25Q9UHL0 483 aaKnown RBP12.16□□□□□ -0.46
PTPN7-201ENST00000309017 AMFRQ9UKV5 643 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 FAM133BQ5BKY9 247 aaKnown RBP12.16□□□□□ -0.46
PTPN7-201ENST00000309017 INTS5Q6P9B9 1019 aaKnown RBP12.16□□□□□ -0.46
PTPN7-201ENST00000309017 CHMP6Q96FZ7 201 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 CEP63Q96MT8 703 aa12.16□□□□□ -0.46
PTPN7-201ENST00000309017 LOC102724428A0A0B4J2F2 783 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 SPDYE3A6NKU9 549 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 USP17L5A8MUK1 530 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 MMEP08473 750 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 XRCC5P13010 732 aaKnown RBP12.15□□□□□ -0.46
PTPN7-201ENST00000309017 PLTPP55058 493 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 SIK1P57059 783 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 DENND2CQ68D51 928 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 ZNF571Q7Z3V5 609 aaPredicted RBP12.15□□□□□ -0.46
PTPN7-201ENST00000309017 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
PTPN7-201ENST00000309017 CCDC63Q8NA47 563 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 FAM114A2Q9NRY5 505 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 HGSO14964 777 aaPredicted RBP12.15□□□□□ -0.46
PTPN7-201ENST00000309017 NEBLO76041 1014 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 SPRED3Q2MJR0 410 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 COBLL1Q53SF7 1204 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 AGBL2Q5U5Z8 902 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 TBC1D1Q86TI0 1168 aaPredicted RBP12.15□□□□□ -0.46
PTPN7-201ENST00000309017 SYCE1Q8N0S2 351 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 FGFBP2Q9BYJ0 223 aa12.15□□□□□ -0.46
PTPN7-201ENST00000309017 A1CFQ9NQ94 594 aaKnown RBP12.15□□□□□ -0.46
PTPN7-201ENST00000309017 RGS16O15492 202 aaPredicted RBP12.15□□□□□ -0.47
PTPN7-201ENST00000309017 COPB2P35606 906 aa12.15□□□□□ -0.47
PTPN7-201ENST00000309017 RPAINQ86UA6 219 aa12.15□□□□□ -0.47
PTPN7-201ENST00000309017 RSRC1Q96IZ7 334 aaKnown RBP12.15□□□□□ -0.47
PTPN7-201ENST00000309017 PAGR1Q9BTK6 254 aa12.15□□□□□ -0.47
PTPN7-201ENST00000309017 RAB17Q9H0T7 212 aa12.15□□□□□ -0.47
PTPN7-201ENST00000309017 SLC12A6Q9UHW9 1150 aa12.15□□□□□ -0.47
PTPN7-201ENST00000309017 GGA2Q9UJY4 613 aa12.15□□□□□ -0.47
PTPN7-201ENST00000309017 NAGPAQ9UK23 515 aa12.15□□□□□ -0.47
PTPN7-201ENST00000309017 RASA1P20936 1047 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 SLCO1A2P46721 670 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 CCDC25Q86WR0 208 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 TRIM59Q8IWR1 403 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 TEX11Q8IYF3 940 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 CEP95Q96GE4 821 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 XPO6Q96QU8 1125 aaKnown RBP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 ELAC2Q9BQ52 826 aaKnown RBP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 PCDHB13Q9Y5F0 798 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 CD2APQ9Y5K6 639 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms