RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 DKK3Q9UBP4 350 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 SLC4A7Q9Y6M7 1214 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 RFX1P22670 979 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 CYP4F22Q6NT55 531 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 TTC6Q86TZ1 520 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 SMYD3Q9H7B4 428 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 SF3A3Q12874 501 aaKnown RBP eCLIP20.68■□□□□ 0.94e-7■■■■■ 32.6
BPTF-201ENST00000306378 CABP7Q86V35 215 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 GPBP1Q86WP2 473 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 CD19P15391 556 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 MFN1Q8IWA4 741 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 OSBPL5Q9H0X9 879 aaPredicted RBP20.68■□□□□ 0.9
BPTF-201ENST00000306378 PUM3Q15397 648 aaKnown RBP20.68■□□□□ 0.9
BPTF-201ENST00000306378 CCDC127Q96BQ5 260 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 ACSL3O95573 720 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 NT5C2P49902 561 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 ARHGAP22Q7Z5H3 698 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 TRPC7Q9HCX4 862 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 EFTUD2Q15029 972 aaKnown RBP eCLIP20.68■□□□□ 0.98e-7■□□□□ 10.5
BPTF-201ENST00000306378 SCG3Q8WXD2 468 aaKnown RBP20.68■□□□□ 0.9
BPTF-201ENST00000306378 RGL1Q9NZL6 768 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 PRDM1O75626 825 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 HP1BP3Q5SSJ5 553 aaPredicted RBP20.67■□□□□ 0.9
BPTF-201ENST00000306378 MAST3O60307 1309 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 FAM25AB3EWG3 89 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 FAM25CB3EWG5 89 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 FAM25GB3EWG6 89 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 DENND2AQ9ULE3 1009 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 PCDHA7Q9UN72 937 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 KRT26Q7Z3Y9 468 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 TOMM70O94826 608 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 VHLP40337 213 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 FLT4P35916 1363 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 MAGEA13PA6NCF6 341 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 S100A9P06702 114 aaKnown RBP20.67■□□□□ 0.9
BPTF-201ENST00000306378 MARK3P27448 753 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 CD209Q9NNX6 404 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 TYW5A2RUC4 315 aaKnown RBP20.67■□□□□ 0.9
BPTF-201ENST00000306378 LDHBP07195 334 aaKnown RBP20.67■□□□□ 0.9
BPTF-201ENST00000306378 MAPK4P31152 587 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 TSC22D1Q15714 1073 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 KIF19Q2TAC6 998 aa20.67■□□□□ 0.9
BPTF-201ENST00000306378 MED7O43513 233 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 MYL7Q01449 175 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 CEP95Q96GE4 821 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 FAM161BQ96MY7 647 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 SYDE1Q6ZW31 735 aaPredicted RBP20.66■□□□□ 0.9
BPTF-201ENST00000306378 SIKE1Q9BRV8 207 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 CTCFP49711 727 aaPredicted RBP20.66■□□□□ 0.9
BPTF-201ENST00000306378 SETD3Q86TU7 594 aaPredicted RBP20.66■□□□□ 0.9
BPTF-201ENST00000306378 TESK2Q96S53 571 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 PLIN2Q99541 437 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 BEGAINQ9BUH8 593 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.66■□□□□ 0.9
BPTF-201ENST00000306378 ACTN3Q08043 901 aaPredicted RBP20.66■□□□□ 0.9
BPTF-201ENST00000306378 DHX34Q14147 1143 aaKnown RBP20.66■□□□□ 0.9
BPTF-201ENST00000306378 GPBP1L1Q9HC44 474 aaPredicted RBP20.66■□□□□ 0.9
BPTF-201ENST00000306378 NBNO60934 754 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 NFKBIAP25963 317 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 OLFM1Q99784 485 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 FAM167BQ9BTA0 163 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 PAPOLBQ9NRJ5 636 aaKnown RBP20.66■□□□□ 0.9
BPTF-201ENST00000306378 USP15Q9Y4E8 981 aaPredicted RBP20.66■□□□□ 0.9
BPTF-201ENST00000306378 PGM1P36871 562 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 NDUFA8P51970 172 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 FKBP3Q00688 224 aaKnown RBP20.66■□□□□ 0.9
BPTF-201ENST00000306378 KCNK16Q96T55 309 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 LZTS1Q9Y250 596 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 CFLARO15519 480 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 SRGAP2CP0DJJ0 459 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 TP53BP2Q13625 1128 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 TRIM71Q2Q1W2 868 aaKnown RBP20.66■□□□□ 0.9
BPTF-201ENST00000306378 IKBIPQ70UQ0 350 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 KBTBD3Q8NAB2 608 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 PANK4Q9NVE7 773 aa20.66■□□□□ 0.9
BPTF-201ENST00000306378 KRT87PA6NCN2 255 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 CHRNA3P32297 505 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 TMC5Q6UXY8 1006 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 USP33Q8TEY7 942 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 IFNL2Q8IZJ0 200 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 ABCE1P61221 599 aaKnown RBP20.65■□□□□ 0.9
BPTF-201ENST00000306378 NR5A1Q13285 461 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 BYSLQ13895 437 aaKnown RBP20.65■□□□□ 0.9
BPTF-201ENST00000306378 TTBK2Q6IQ55 1244 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 PCDHA13Q9Y5I0 950 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 H0YC42 278 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 ADCK5Q3MIX3 580 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 ZBTB41Q5SVQ8 909 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 SGSM3Q96HU1 749 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 EPAS1Q99814 870 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 FTOQ9C0B1 505 aaKnown RBP eCLIP20.65■□□□□ 0.9
BPTF-201ENST00000306378 ARHGEF11O15085 1522 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 AKNAD1Q5T1N1 836 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 TRIM67Q6ZTA4 783 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 PRUNE1Q86TP1 453 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 PHF21AQ96BD5 680 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 RHBDL2Q9NX52 303 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 ATP10DQ9P241 1426 aa20.65■□□□□ 0.9
BPTF-201ENST00000306378 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
BPTF-201ENST00000306378 MFAP3LO75121 409 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms