RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 TUBE1Q9UJT0 475 aa17.78■□□□□ 0.44
FANCA-201ENST00000305699 TRPC6Q9Y210 931 aa17.78■□□□□ 0.44
FANCA-201ENST00000305699 GTPBP6O43824 516 aaPredicted RBP17.77■□□□□ 0.44
FANCA-201ENST00000305699 IFNAR1P17181 557 aa17.77■□□□□ 0.44
FANCA-201ENST00000305699 NTRK3Q16288 839 aa17.77■□□□□ 0.44
FANCA-201ENST00000305699 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.77■□□□□ 0.44
FANCA-201ENST00000305699 NIPA1Q7RTP0 329 aa17.77■□□□□ 0.44
FANCA-201ENST00000305699 RSPH3Q86UC2 560 aa17.77■□□□□ 0.44
FANCA-201ENST00000305699 MYOCDQ8IZQ8 938 aa17.77■□□□□ 0.44
FANCA-201ENST00000305699 BICD2Q8TD16 824 aa17.77■□□□□ 0.44
FANCA-201ENST00000305699 TNPO1Q92973 898 aaKnown RBP17.77■□□□□ 0.44
FANCA-201ENST00000305699 PCYT2Q99447 389 aa17.77■□□□□ 0.44
FANCA-201ENST00000305699 RAD9AQ99638 391 aa17.77■□□□□ 0.44
FANCA-201ENST00000305699 COL25A1Q9BXS0 654 aaPredicted RBP17.77■□□□□ 0.44
FANCA-201ENST00000305699 UPF3BQ9BZI7 483 aaKnown RBP17.77■□□□□ 0.44
FANCA-201ENST00000305699 PRDM6Q9NQX0 595 aa17.77■□□□□ 0.44
FANCA-201ENST00000305699 MICAL3Q7RTP6 2002 aa17.77■□□□□ 0.43
FANCA-201ENST00000305699 VCANP13611 3396 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 FAM86B1E9PN63 330 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 ADAMTS3O15072 1205 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 FAM86B2P0C5J1 330 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 INSRRP14616 1297 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 STAT5BP51692 787 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 EVCP57679 992 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 TOB2Q14106 344 aaPredicted RBP17.76■□□□□ 0.43
FANCA-201ENST00000305699 TRIM22Q8IYM9 498 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 RASGRP4Q8TDF6 673 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 UIMC1Q96RL1 719 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 LARP6Q9BRS8 491 aaKnown RBP17.76■□□□□ 0.43
FANCA-201ENST00000305699 TM6SF1Q9BZW5 370 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 VPS54Q9P1Q0 977 aa17.76■□□□□ 0.43
FANCA-201ENST00000305699 EPOPA6NHQ4 379 aa17.75■□□□□ 0.43
FANCA-201ENST00000305699 RRN3P2A6NIE6 340 aa17.75■□□□□ 0.43
FANCA-201ENST00000305699 CPLX1O14810 134 aa17.75■□□□□ 0.43
FANCA-201ENST00000305699 BACH1O14867 736 aa17.75■□□□□ 0.43
FANCA-201ENST00000305699 CYP3A4P08684 503 aa17.75■□□□□ 0.43
FANCA-201ENST00000305699 PLCB4Q15147 1175 aa17.75■□□□□ 0.43
FANCA-201ENST00000305699 FAM26DQ5JW98 314 aa17.75■□□□□ 0.43
FANCA-201ENST00000305699 OSBPL7Q9BZF2 842 aa17.75■□□□□ 0.43
FANCA-201ENST00000305699 MTUS1Q9ULD2 1270 aa17.75■□□□□ 0.43
FANCA-201ENST00000305699 CHRNA1P02708 482 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 SETQ01105 290 aaPredicted RBP17.74■□□□□ 0.43
FANCA-201ENST00000305699 SSRP1Q08945 709 aaKnown RBP17.74■□□□□ 0.43
FANCA-201ENST00000305699 STK3Q13188 491 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 MARCH8Q5T0T0 291 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 FAM160B1Q5W0V3 765 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 PLPPR4Q7Z2D5 763 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 SPRED2Q7Z698 418 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 DNAJB3Q8WWF6 145 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 CRYGNQ8WXF5 182 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 APBB2Q92870 758 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 ZBTB10Q96DT7 871 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 ZNF577Q9BSK1 485 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 IFIH1Q9BYX4 1025 aaKnown RBP17.74■□□□□ 0.43
FANCA-201ENST00000305699 FAM49AQ9H0Q0 323 aaPredicted RBP17.74■□□□□ 0.43
FANCA-201ENST00000305699 PDRG1Q9NUG6 133 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 TCEAL9Q9UHQ7 104 aa17.74■□□□□ 0.43
FANCA-201ENST00000305699 IGLV3-22A0A075B6J6 115 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 POTEB3A0JP26 581 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 MBLAC1A4D2B0 266 aaPredicted RBP17.73■□□□□ 0.43
FANCA-201ENST00000305699 IPO5O00410 1097 aaKnown RBP17.73■□□□□ 0.43
FANCA-201ENST00000305699 CCNE2O96020 404 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 GHRP10912 638 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 NLRP5P59047 1200 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 PRR16Q569H4 304 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 ERICH6BQ5W0A0 696 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 CPLX2Q6PUV4 134 aaKnown RBP17.73■□□□□ 0.43
FANCA-201ENST00000305699 POTEBQ6S5H4 581 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 RPAINQ86UA6 219 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 TRAPPC12Q8WVT3 735 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 ZNF274Q96GC6 653 aaPredicted RBP17.73■□□□□ 0.43
FANCA-201ENST00000305699 TSPYL2Q9H2G4 693 aaPredicted RBP17.73■□□□□ 0.43
FANCA-201ENST00000305699 THEGQ9P2T0 379 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 INSL6Q9Y581 213 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 REV3LO60673 3130 aa17.73■□□□□ 0.43
FANCA-201ENST00000305699 UPP2O95045 317 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 ATG7O95352 703 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 MRPS6P82932 125 aaKnown RBP17.72■□□□□ 0.43
FANCA-201ENST00000305699 SKIV2LQ15477 1246 aaKnown RBP17.72■□□□□ 0.43
FANCA-201ENST00000305699 MIS18BP1Q6P0N0 1132 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 TGS1Q96RS0 853 aaKnown RBP17.72■□□□□ 0.43
FANCA-201ENST00000305699 TBC1D22BQ9NU19 505 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 MTCH2Q9Y6C9 303 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 CDY2AQ9Y6F7 541 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 PRRC2BQ5JSZ5 2229 aaKnown RBP17.72■□□□□ 0.43
FANCA-201ENST00000305699 LINC01553A4QN01 128 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 DEXIO95424 95 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 RPLP2P05387 115 aaKnown RBP17.72■□□□□ 0.43
FANCA-201ENST00000305699 SLC26A2P50443 739 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 GRB10Q13322 594 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 MKRN4PQ13434 485 aaPredicted RBP17.72■□□□□ 0.43
FANCA-201ENST00000305699 LPIN1Q14693 890 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 KRT40Q6A162 431 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 PDXDC2PQ6P474 469 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 ABHD15Q6UXT9 468 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 YME1L1Q96TA2 773 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 ZNF302Q9NR11 478 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 SH3GLB2Q9NR46 395 aa17.72■□□□□ 0.43
FANCA-201ENST00000305699 SIP14410 1827 aa17.71■□□□□ 0.43
FANCA-201ENST00000305699 COL4A4P53420 1690 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms