RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 DRC3Q9H069 523 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 EPN3Q9H201 632 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 SLITRK6Q9H5Y7 841 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 HESX1Q9UBX0 185 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 ITIH6Q6UXX5 1313 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 PNPLA6Q8IY17 1366 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 MEIS1O00470 390 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 NCK2O43639 380 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 CCDC117Q8IWD4 279 aaPredicted RBP13.85□□□□□ -0.19
COL3A1-201ENST00000304636 PPP1R37O75864 691 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 EXOSC10Q01780 885 aaKnown RBP13.85□□□□□ -0.19
COL3A1-201ENST00000304636 SDCCAG3Q96C92 435 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 HOOK2Q96ED9 719 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 TRIM55Q9BYV6 548 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 SUDS3Q9H7L9 328 aaPredicted RBP13.85□□□□□ -0.19
COL3A1-201ENST00000304636 LEMD3Q9Y2U8 911 aa13.85□□□□□ -0.19
COL3A1-201ENST00000304636 SPECC1L-ADORA2AF8WAN1 911 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 EIF3HO15372 352 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL3A1-201ENST00000304636 FAM83BQ5T0W9 1011 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 SUPT20HQ8NEM7 779 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 EFHD1Q9BUP0 239 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 A6NJR5 290 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 FOXN1O15353 648 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 ALAS1P13196 640 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 ALCAMQ13740 583 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL3A1-201ENST00000304636 RNF207Q6ZRF8 634 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 ZNF710Q8N1W2 664 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.84□□□□□ -0.19
COL3A1-201ENST00000304636 SNX12Q9UMY4 172 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 CYP2D7A0A087X1C5 515 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 CNGA1P29973 690 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 LLGL1Q15334 1064 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 HAUS8Q9BT25 410 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 PCIF1Q9H4Z3 704 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 SEC31BQ9NQW1 1179 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 SEPT10Q9P0V9 454 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 ZFYVE16Q7Z3T8 1539 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 LRRC7Q96NW7 1537 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 FAM187AA6NFU0 413 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 GYG2O15488 501 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 STMN1P16949 149 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 ALDH1B1P30837 517 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 ALX1Q15699 326 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 USP17L2Q6R6M4 530 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 PYROXD1Q8WU10 500 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 GLG1Q92896 1179 aa13.84□□□□□ -0.19
COL3A1-201ENST00000304636 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.84□□□□□ -0.19
COL3A1-201ENST00000304636 WDR91A4D1P6 747 aa13.83□□□□□ -0.19
COL3A1-201ENST00000304636 TTC36A6NLP5 189 aa13.83□□□□□ -0.19
COL3A1-201ENST00000304636 ABCD1P33897 745 aa13.83□□□□□ -0.19
COL3A1-201ENST00000304636 BASP1P80723 227 aaKnown RBP13.83□□□□□ -0.19
COL3A1-201ENST00000304636 SGMS1Q86VZ5 419 aa13.83□□□□□ -0.19
COL3A1-201ENST00000304636 MMS19Q96T76 1030 aa13.83□□□□□ -0.19
COL3A1-201ENST00000304636 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.19
COL3A1-201ENST00000304636 EDEM3Q9BZQ6 932 aa13.83□□□□□ -0.19
COL3A1-201ENST00000304636 RASA4BC9J798 803 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 TRIM66O15016 1216 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 RASA4O43374 803 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 GSTA1P08263 222 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 GSTA2P09210 222 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 MDH1P40925 334 aaKnown RBP13.83□□□□□ -0.2
COL3A1-201ENST00000304636 POLGP54098 1239 aaPredicted RBP13.83□□□□□ -0.2
COL3A1-201ENST00000304636 ORC2Q13416 577 aaPredicted RBP13.83□□□□□ -0.2
COL3A1-201ENST00000304636 DNAJC24Q6P3W2 148 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 SERPINI1Q99574 410 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 IRX2Q9BZI1 471 aaPredicted RBP13.83□□□□□ -0.2
COL3A1-201ENST00000304636 TUBE1Q9UJT0 475 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 GINS2Q9Y248 185 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 ECE1P42892 770 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 GUCY1A3Q02108 690 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 EPM2AIP1Q7L775 607 aaPredicted RBP13.83□□□□□ -0.2
COL3A1-201ENST00000304636 ZC3H18Q86VM9 953 aaKnown RBP13.83□□□□□ -0.2
COL3A1-201ENST00000304636 PDIK1LQ8N165 341 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 PDZD8Q8NEN9 1154 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 SPDL1Q96EA4 605 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 LRRC1Q9BTT6 524 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 DNAJC12Q9UKB3 198 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 PACSIN2Q9UNF0 486 aaPredicted RBP13.83□□□□□ -0.2
COL3A1-201ENST00000304636 NLRP1Q9C000 1473 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 ROBO2Q9HCK4 1378 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 DLGAP5Q15398 846 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 TAF12Q16514 161 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 ABCB5Q2M3G0 1257 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 KCTD1Q719H9 257 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 ECT2Q9H8V3 914 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 ADGRL3Q9HAR2 1447 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 XDHP47989 1333 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 PNMA6FA0A0J9YX94 578 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 ERVV-1B6SEH8 477 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 SPAG7O75391 227 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 CHRNA3P32297 505 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 ZBTB17Q13105 803 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 NR1I3Q14994 352 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 JADE1Q6IE81 842 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 HNRNPLLQ8WVV9 542 aaKnown RBP13.83□□□□□ -0.2
COL3A1-201ENST00000304636 MAML1Q92585 1016 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 RAD54LQ92698 747 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms