RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 FRMD3A2A2Y4 597 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 USO1O60763 962 aaKnown RBP20.56■□□□□ 0.88
RNF139-201ENST00000303545 GCNT3O95395 438 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 NAP1L1P55209 391 aaKnown RBP20.56■□□□□ 0.88
RNF139-201ENST00000303545 KCNH2Q12809 1159 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 DGKZQ13574 1117 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 DCAF17Q5H9S7 520 aaPredicted RBP20.56■□□□□ 0.88
RNF139-201ENST00000303545 DNAAF5Q86Y56 855 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 OGFOD1Q8N543 542 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 SUPT20HQ8NEM7 779 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 SH2D4AQ9H788 454 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 STK32BQ9NY57 414 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 HERC5Q9UII4 1024 aaKnown RBP20.56■□□□□ 0.88
RNF139-201ENST00000303545 RABGAP1Q9Y3P9 1069 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 IGLV3-22A0A075B6J6 115 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 DDX39AO00148 427 aaKnown RBP20.56■□□□□ 0.88
RNF139-201ENST00000303545 MMP14P50281 582 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 FAM133AQ8N9E0 248 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 EHBP1Q8NDI1 1231 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 FAM20AQ96MK3 541 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 CEP63Q96MT8 703 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 GDAP1L1Q96MZ0 367 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 PURBQ96QR8 312 aaKnown RBP20.56■□□□□ 0.88
RNF139-201ENST00000303545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.56■□□□□ 0.88
RNF139-201ENST00000303545 TMX2Q9Y320 296 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 TBX3O15119 743 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 CETN3O15182 167 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 CASP4P49662 377 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 UTP14CQ5TAP6 766 aaKnown RBP20.55■□□□□ 0.88
RNF139-201ENST00000303545 SFMBT2Q5VUG0 894 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 LRCH2Q5VUJ6 765 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 GOPCQ9HD26 462 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 HDAC9Q9UKV0 1011 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 RAB21Q9UL25 225 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 SLC9A1P19634 815 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 TCERG1LQ5VWI1 586 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 NFRKBQ6P4R8 1299 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 TTLL6Q8N841 843 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 COG1Q8WTW3 980 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 FAM151AQ8WW52 585 aa20.55■□□□□ 0.88
RNF139-201ENST00000303545 PITPNM2Q9BZ72 1349 aa20.54■□□□□ 0.88
RNF139-201ENST00000303545 ERICH4A6NGS2 130 aa20.54■□□□□ 0.88
RNF139-201ENST00000303545 NMT1P30419 496 aaKnown RBP20.54■□□□□ 0.88
RNF139-201ENST00000303545 CIITAP33076 1130 aa20.54■□□□□ 0.88
RNF139-201ENST00000303545 MATR3P43243 847 aaKnown RBP eCLIP20.54■□□□□ 0.88
RNF139-201ENST00000303545 KNOP1Q1ED39 458 aaKnown RBP20.54■□□□□ 0.88
RNF139-201ENST00000303545 ZC2HC1CQ53FD0 456 aaPredicted RBP20.54■□□□□ 0.88
RNF139-201ENST00000303545 GSPT2Q8IYD1 628 aaKnown RBP20.54■□□□□ 0.88
RNF139-201ENST00000303545 CEP72Q9P209 647 aa20.54■□□□□ 0.88
RNF139-201ENST00000303545 H3BQF6 201 aa20.54■□□□□ 0.88
RNF139-201ENST00000303545 GCOM1H8Y6P7 765 aaPredicted RBP20.54■□□□□ 0.88
RNF139-201ENST00000303545 POLR2MP0CAP2 368 aa20.54■□□□□ 0.88
RNF139-201ENST00000303545 NBPF9Q3BBW0 867 aa20.54■□□□□ 0.88
RNF139-201ENST00000303545 ZNF662Q6ZS27 426 aa20.54■□□□□ 0.88
RNF139-201ENST00000303545 TRMT1LQ7Z2T5 733 aaKnown RBP20.54■□□□□ 0.88
RNF139-201ENST00000303545 TBCAO75347 108 aaKnown RBP20.53■□□□□ 0.88
RNF139-201ENST00000303545 TACC1O75410 805 aa20.53■□□□□ 0.88
RNF139-201ENST00000303545 ARP10275 920 aa20.53■□□□□ 0.88
RNF139-201ENST00000303545 DPEP1P16444 411 aa20.53■□□□□ 0.88
RNF139-201ENST00000303545 OTOP1Q7RTM1 612 aa20.53■□□□□ 0.88
RNF139-201ENST00000303545 AGBL1Q96MI9 1066 aa20.53■□□□□ 0.88
RNF139-201ENST00000303545 TSGA10Q9BZW7 698 aa20.53■□□□□ 0.88
RNF139-201ENST00000303545 PDE11AQ9HCR9 933 aa20.53■□□□□ 0.88
RNF139-201ENST00000303545 WRAP73Q9P2S5 460 aaPredicted RBP20.53■□□□□ 0.88
RNF139-201ENST00000303545 N4BP1O75113 896 aaKnown RBP20.53■□□□□ 0.88
RNF139-201ENST00000303545 AKAP3O75969 853 aa20.53■□□□□ 0.88
RNF139-201ENST00000303545 SLITRK3O94933 977 aa20.53■□□□□ 0.88
RNF139-201ENST00000303545 ASTE1Q2TB18 679 aaPredicted RBP20.53■□□□□ 0.88
RNF139-201ENST00000303545 RINT1Q6NUQ1 792 aa20.53■□□□□ 0.88
RNF139-201ENST00000303545 IQCDQ96DY2 449 aa20.53■□□□□ 0.88
RNF139-201ENST00000303545 POTEB2H3BUK9 544 aa20.52■□□□□ 0.88
RNF139-201ENST00000303545 VIL1P09327 827 aaKnown RBP20.52■□□□□ 0.88
RNF139-201ENST00000303545 MYCT1Q8N699 235 aa20.52■□□□□ 0.88
RNF139-201ENST00000303545 GMLQ99445 158 aa20.52■□□□□ 0.88
RNF139-201ENST00000303545 PCDHB13Q9Y5F0 798 aa20.52■□□□□ 0.88
RNF139-201ENST00000303545 KIF20AO95235 890 aa20.52■□□□□ 0.87
RNF139-201ENST00000303545 GNA14O95837 355 aa20.52■□□□□ 0.87
RNF139-201ENST00000303545 SPDYE2Q495Y8 402 aa20.52■□□□□ 0.87
RNF139-201ENST00000303545 SLC9C1Q4G0N8 1177 aa20.52■□□□□ 0.87
RNF139-201ENST00000303545 MAEAQ7L5Y9 396 aa20.52■□□□□ 0.87
RNF139-201ENST00000303545 PACSIN1Q9BY11 444 aa20.52■□□□□ 0.87
RNF139-201ENST00000303545 ARMCX3Q9UH62 379 aaPredicted RBP20.52■□□□□ 0.87
RNF139-201ENST00000303545 TNS1Q9HBL0 1735 aaKnown RBP20.51■□□□□ 0.87
RNF139-201ENST00000303545 PIK3CDO00329 1044 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 ATP8B1O43520 1251 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 GAS7O60861 476 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 ERLIN1O75477 346 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 EYA4O95677 639 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 CYP3A4P08684 503 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 USP14P54578 494 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 PLS1Q14651 629 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 COG2Q14746 738 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 TRIM58Q8NG06 486 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 ADAMTS1Q9UHI8 967 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 ASTN1O14525 1302 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 LCA5LO95447 670 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 GJB7Q6PEY0 223 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 EPM2AIP1Q7L775 607 aaPredicted RBP20.51■□□□□ 0.87
RNF139-201ENST00000303545 LDHDQ86WU2 507 aa20.51■□□□□ 0.87
RNF139-201ENST00000303545 BANK1Q8NDB2 785 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms