RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 RBM41Q96IZ5 413 aaKnown RBP15.7■□□□□ 0.1
CDT1-201ENST00000301019 ISCUQ9H1K1 167 aa15.7■□□□□ 0.1
CDT1-201ENST00000301019 EPB41L4AQ9HCS5 686 aaPredicted RBP15.7■□□□□ 0.1
CDT1-201ENST00000301019 HAO1Q9UJM8 370 aa15.7■□□□□ 0.1
CDT1-201ENST00000301019 PLAGL2Q9UPG8 496 aa15.7■□□□□ 0.1
CDT1-201ENST00000301019 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.7■□□□□ 0.1
CDT1-201ENST00000301019 GOLGB1Q14789 3259 aaKnown RBP15.69■□□□□ 0.1
CDT1-201ENST00000301019 A0A1W2PQC6 194 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 F8VZ95 297 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 H7C1W4 665 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 NMT2O60551 498 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 EEF1GP26641 437 aaKnown RBP15.69■□□□□ 0.1
CDT1-201ENST00000301019 RCN2Q14257 317 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 CRELD2Q6UXH1 353 aaPredicted RBP15.69■□□□□ 0.1
CDT1-201ENST00000301019 CYP27B1O15528 508 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 KRT13P13646 458 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 COPS2P61201 443 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 EVX2Q03828 476 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 TMC3Q7Z5M5 1100 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 FAM81AQ8TBF8 368 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 LRRC15Q8TF66 581 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 TMEM87BQ96K49 555 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 FGD4Q96M96 766 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 CHORDC1Q9UHD1 332 aaPredicted RBP15.69■□□□□ 0.1
CDT1-201ENST00000301019 UTYO14607 1347 aa15.69■□□□□ 0.1
CDT1-201ENST00000301019 C5orf60A6NFR6 353 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 ATP6V1G1O75348 118 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 NPM3O75607 178 aaKnown RBP15.68■□□□□ 0.1
CDT1-201ENST00000301019 BIRC3Q13489 604 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 CCDC6Q16204 474 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 TCERG1LQ5VWI1 586 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 AADACL2Q6P093 401 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 VSIG1Q86XK7 387 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 PREBQ9HCU5 417 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 CTNNAL1Q9UBT7 734 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 GGA2Q9UJY4 613 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 NOC2LQ9Y3T9 749 aaKnown RBP15.68■□□□□ 0.1
CDT1-201ENST00000301019 IL2RBP14784 551 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 XBP1P17861 261 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 LONRF1Q17RB8 773 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 IFNL3Q8IZI9 196 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 RMND1Q9NWS8 449 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 PTPN22Q9Y2R2 807 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 GRID2IPA4D2P6 1211 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 GHRP10912 638 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 GM2AP17900 193 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 APBB1IPQ7Z5R6 666 aaPredicted RBP15.68■□□□□ 0.1
CDT1-201ENST00000301019 MFN1Q8IWA4 741 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 TTC5Q8N0Z6 440 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 P2RX5Q93086 422 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 DYDC2Q96IM9 177 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 INPP4AQ96PE3 977 aaPredicted RBP15.68■□□□□ 0.1
CDT1-201ENST00000301019 SEMA4AQ9H3S1 761 aa15.68■□□□□ 0.1
CDT1-201ENST00000301019 SP100P23497 879 aaPredicted RBP15.67■□□□□ 0.1
CDT1-201ENST00000301019 CCNFP41002 786 aa15.67■□□□□ 0.1
CDT1-201ENST00000301019 RNF10Q8N5U6 811 aaKnown RBP15.67■□□□□ 0.1
CDT1-201ENST00000301019 ABTB1Q969K4 478 aaPredicted RBP15.67■□□□□ 0.1
CDT1-201ENST00000301019 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.67■□□□□ 0.11e-6■■□□□ 11.9
CDT1-201ENST00000301019 TMEM60Q9H2L4 133 aa15.67■□□□□ 0.1
CDT1-201ENST00000301019 ACSL3O95573 720 aa15.67■□□□□ 0.1
CDT1-201ENST00000301019 FUT4P22083 530 aa15.67■□□□□ 0.1
CDT1-201ENST00000301019 BICDL1Q6ZP65 573 aa15.67■□□□□ 0.1
CDT1-201ENST00000301019 ELOA2Q8IYF1 753 aaPredicted RBP15.67■□□□□ 0.1
CDT1-201ENST00000301019 FERMT2Q96AC1 680 aa15.67■□□□□ 0.1
CDT1-201ENST00000301019 FMO2Q99518 471 aa15.67■□□□□ 0.1
CDT1-201ENST00000301019 COL14A1Q05707 1796 aaKnown RBP15.67■□□□□ 0.1
CDT1-201ENST00000301019 LUC7L3O95232 432 aaKnown RBP15.66■□□□□ 0.1
CDT1-201ENST00000301019 PHKA1P46020 1223 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 UBE4AQ14139 1066 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 GALNT15Q8N3T1 639 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 ZCRB1Q8TBF4 217 aaKnown RBP15.66■□□□□ 0.1
CDT1-201ENST00000301019 CCHCR1Q8TD31 782 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 PDE6AP16499 860 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 EPHB2P29323 1055 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 MREGQ8N565 214 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 METTL13Q8N6R0 699 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 MOV10L1Q9BXT6 1211 aaKnown RBP15.66■□□□□ 0.1
CDT1-201ENST00000301019 CBX6O95503 412 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 FGGP02679 453 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 ABCB4P21439 1286 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 PTDSS1P48651 473 aaKnown RBP15.66■□□□□ 0.1
CDT1-201ENST00000301019 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
CDT1-201ENST00000301019 KLC1Q07866 573 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 NAALADL2Q58DX5 795 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 FOXB2Q5VYV0 432 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 DENND2CQ68D51 928 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 NELFCDQ8IXH7 590 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 ATXN2LQ8WWM7 1075 aaKnown RBP15.66■□□□□ 0.1
CDT1-201ENST00000301019 ZHX3Q9H4I2 956 aa15.66■□□□□ 0.1
CDT1-201ENST00000301019 TNKSO95271 1327 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 CFAP73A6NFT4 308 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 CETN3O15182 167 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 SNX3O60493 162 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 SPATA31D3P0C874 917 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 ACTN1P12814 892 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 ALDH3A1P30838 453 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 PKN1Q16512 942 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 AKNAD1Q5T1N1 836 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 SPATA31D4Q6ZUB0 917 aa15.65■□□□□ 0.1
CDT1-201ENST00000301019 PTF1AQ7RTS3 328 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms