RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 MYBP10242 640 aa24.2■■□□□ 1.46
TPM4-201ENST00000300933 CIITAP33076 1130 aa24.2■■□□□ 1.46
TPM4-201ENST00000300933 ZBED6P86452 979 aa24.2■■□□□ 1.46
TPM4-201ENST00000300933 FKBP3Q00688 224 aaKnown RBP24.2■■□□□ 1.46
TPM4-201ENST00000300933 DALRD3Q5D0E6 543 aaKnown RBP24.2■■□□□ 1.46
TPM4-201ENST00000300933 HDXQ7Z353 690 aa24.2■■□□□ 1.46
TPM4-201ENST00000300933 FAM20AQ96MK3 541 aa24.2■■□□□ 1.46
TPM4-201ENST00000300933 RANBP17Q9H2T7 1088 aaKnown RBP24.2■■□□□ 1.46
TPM4-201ENST00000300933 BCS1LQ9Y276 419 aa24.2■■□□□ 1.46
TPM4-201ENST00000300933 LRCH2Q5VUJ6 765 aa24.19■■□□□ 1.46
TPM4-201ENST00000300933 RRAGAQ7L523 313 aa24.19■■□□□ 1.46
TPM4-201ENST00000300933 DYDC2Q96IM9 177 aa24.19■■□□□ 1.46
TPM4-201ENST00000300933 ZNHIT6Q9NWK9 470 aaKnown RBP24.19■■□□□ 1.46
TPM4-201ENST00000300933 PIK3CDO00329 1044 aa24.19■■□□□ 1.46
TPM4-201ENST00000300933 NFIBO00712 420 aa24.19■■□□□ 1.46
TPM4-201ENST00000300933 HDAC6Q9UBN7 1215 aa24.19■■□□□ 1.46
TPM4-201ENST00000300933 COL4A3BPQ9Y5P4 624 aa24.19■■□□□ 1.46
TPM4-201ENST00000300933 ABCB11O95342 1321 aa24.19■■□□□ 1.46
TPM4-201ENST00000300933 ANKRD65E5RJM6 399 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 NFKBIEO00221 500 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 CCDC122Q5T0U0 273 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 RGPD3A6NKT7 1758 aaPredicted RBP24.18■■□□□ 1.46
TPM4-201ENST00000300933 RGPD4Q7Z3J3 1758 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 TBX3O15119 743 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 ADAM9Q13443 819 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 OTOP1Q7RTM1 612 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 FAM83AQ86UY5 434 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 KSR1Q8IVT5 923 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 SYT2Q8N9I0 419 aaPredicted RBP24.18■■□□□ 1.46
TPM4-201ENST00000300933 CCDC102AQ96A19 550 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 NUP58Q9BVL2 599 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 KCTD10Q9H3F6 313 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 CCPG1Q9ULG6 757 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 COL2A1P02458 1487 aaPredicted RBP24.18■■□□□ 1.46
TPM4-201ENST00000300933 RASSF7Q02833 373 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 KCNMA1Q12791 1236 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 GRIPAP1Q4V328 841 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 KIAA1328Q86T90 577 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 COL20A1Q9P218 1284 aa24.18■■□□□ 1.46
TPM4-201ENST00000300933 WRAP73Q9P2S5 460 aaPredicted RBP24.18■■□□□ 1.46
TPM4-201ENST00000300933 CTAGE9A4FU28 777 aa24.17■■□□□ 1.46
TPM4-201ENST00000300933 LRRC53A6NM62 1247 aa24.17■■□□□ 1.46
TPM4-201ENST00000300933 PHF20L1A8MW92 1017 aa24.17■■□□□ 1.46
TPM4-201ENST00000300933 ZNF263O14978 683 aa24.17■■□□□ 1.46
TPM4-201ENST00000300933 ASNSP08243 561 aa24.17■■□□□ 1.46
TPM4-201ENST00000300933 HOXD13P35453 343 aa24.17■■□□□ 1.46
TPM4-201ENST00000300933 ENOX2Q16206 610 aaKnown RBP24.17■■□□□ 1.46
TPM4-201ENST00000300933 MEA1Q16626 185 aa24.17■■□□□ 1.46
TPM4-201ENST00000300933 CDC23Q9UJX2 597 aa24.17■■□□□ 1.46
TPM4-201ENST00000300933 SLITRK3O94933 977 aa24.17■■□□□ 1.46
TPM4-201ENST00000300933 ZBED3Q96IU2 234 aaPredicted RBP24.17■■□□□ 1.46
TPM4-201ENST00000300933 PURBQ96QR8 312 aaKnown RBP24.17■■□□□ 1.46
TPM4-201ENST00000300933 RABGAP1Q9Y3P9 1069 aa24.17■■□□□ 1.46
TPM4-201ENST00000300933 PSME4Q14997 1843 aa24.17■■□□□ 1.46
TPM4-201ENST00000300933 TBC1D12O60347 775 aa24.16■■□□□ 1.46
TPM4-201ENST00000300933 FGFR1OPO95684 399 aaKnown RBP24.16■■□□□ 1.46
TPM4-201ENST00000300933 CYP3A4P08684 503 aa24.16■■□□□ 1.46
TPM4-201ENST00000300933 IL31RAQ8NI17 732 aa24.16■■□□□ 1.46
TPM4-201ENST00000300933 SH2D3AQ9BRG2 576 aa24.16■■□□□ 1.46
TPM4-201ENST00000300933 PLEKHA4Q9H4M7 779 aa24.16■■□□□ 1.46
TPM4-201ENST00000300933 RAVER2Q9HCJ3 691 aaKnown RBP24.16■■□□□ 1.46
TPM4-201ENST00000300933 ARHGAP20Q9P2F6 1191 aa24.16■■□□□ 1.46
TPM4-201ENST00000300933 MACROD2A1Z1Q3 448 aa24.16■■□□□ 1.46
TPM4-201ENST00000300933 HOOK2Q96ED9 719 aa24.16■■□□□ 1.46
TPM4-201ENST00000300933 TEPSINQ96N21 525 aa24.16■■□□□ 1.46
TPM4-201ENST00000300933 MRPL11Q9Y3B7 192 aaKnown RBP24.16■■□□□ 1.46
TPM4-201ENST00000300933 CLIC2O15247 247 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 GAS7O60861 476 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 ALAS1P13196 640 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 NR2F2P24468 414 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 VSNL1P62760 191 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 CEP55Q53EZ4 464 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 RETREG2Q8NC44 543 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 ZNF577Q9BSK1 485 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 L1RE1Q9UN81 338 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 SRGAP2O75044 1071 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 PSMD10O75832 226 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 ARID5AQ03989 594 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 SKIDA1Q1XH10 827 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 FKBP1CQ5VVH2 108 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 MAEAQ7L5Y9 396 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 MICALL2Q8IY33 904 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 CEP112Q8N8E3 955 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 MTMR14Q8NCE2 650 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 CCDC42Q96M95 316 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 HSD17B14Q9BPX1 270 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 FEM1BQ9UK73 627 aa24.15■■□□□ 1.46
TPM4-201ENST00000300933 ZNF536O15090 1300 aa24.14■■□□□ 1.46
TPM4-201ENST00000300933 ERLIN1O75477 346 aa24.14■■□□□ 1.46
TPM4-201ENST00000300933 EIF3JO75822 258 aaKnown RBP24.14■■□□□ 1.46
TPM4-201ENST00000300933 NOP2P46087 812 aaKnown RBP24.14■■□□□ 1.46
TPM4-201ENST00000300933 BANK1Q8NDB2 785 aa24.14■■□□□ 1.46
TPM4-201ENST00000300933 HNRNPLLQ8WVV9 542 aaKnown RBP24.14■■□□□ 1.46
TPM4-201ENST00000300933 GCNT3O95395 438 aa24.14■■□□□ 1.45
TPM4-201ENST00000300933 GMPSP49915 693 aaPredicted RBP24.14■■□□□ 1.45
TPM4-201ENST00000300933 ZC2HC1CQ53FD0 456 aaPredicted RBP24.14■■□□□ 1.45
TPM4-201ENST00000300933 NBPF12Q5TAG4 269 aaPredicted RBP24.14■■□□□ 1.45
TPM4-201ENST00000300933 MCTP2Q6DN12 878 aa24.14■■□□□ 1.45
TPM4-201ENST00000300933 RINT1Q6NUQ1 792 aa24.14■■□□□ 1.45
TPM4-201ENST00000300933 CACNA2D4Q7Z3S7 1137 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms