RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 C10orf88Q9H8K7 445 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 SPHKAPQ2M3C7 1700 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 FMNL1O95466 1100 aaPredicted RBP12.12□□□□□ -0.47
GCN1-201ENST00000300648 KCNJ6P48051 423 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 TBC1D23Q9NUY8 699 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 TOM1L1O75674 476 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 CPA1P15085 419 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 PMLP29590 882 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 DPP8Q6V1X1 898 aaPredicted RBP12.12□□□□□ -0.47
GCN1-201ENST00000300648 SAMD9LQ8IVG5 1584 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 NIM1KQ8IY84 436 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 SH3GLB2Q9NR46 395 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 WDR64B1ANS9 1081 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 ODR4Q5SWX8 454 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 MMS19Q96T76 1030 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 BIN2Q9UBW5 565 aaPredicted RBP12.12□□□□□ -0.47
GCN1-201ENST00000300648 SAP30BPQ9UHR5 308 aaKnown RBP12.12□□□□□ -0.47
GCN1-201ENST00000300648 ADAM21Q9UKJ8 722 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 CIITAP33076 1130 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 TECP42680 631 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 HSPA2P54652 639 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 MESDQ14696 234 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 PNMA1Q8ND90 353 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 OPTNQ96CV9 577 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 NAF1Q96HR8 494 aaKnown RBP12.12□□□□□ -0.47
GCN1-201ENST00000300648 FAM129AQ9BZQ8 928 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 PCDHA4Q9UN74 947 aa12.12□□□□□ -0.47
GCN1-201ENST00000300648 KRT1P04264 644 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 PLS3P13797 630 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 TCIRG1Q13488 830 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 EPM2AIP1Q7L775 607 aaPredicted RBP12.11□□□□□ -0.47
GCN1-201ENST00000300648 PATL1Q86TB9 770 aaKnown RBP12.11□□□□□ -0.47
GCN1-201ENST00000300648 MRFAP1Q9Y605 127 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 TMEM2Q9UHN6 1383 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 PRPSAP2O60256 369 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 IL13P35225 146 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 POTEAQ6S8J7 498 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 NUDCD3Q8IVD9 361 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 MOV10L1Q9BXT6 1211 aaKnown RBP12.11□□□□□ -0.47
GCN1-201ENST00000300648 PFASO15067 1338 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 GMNCA6NCL1 334 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 C16orf96A6NNT2 1141 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 MRPL28Q13084 256 aaKnown RBP12.11□□□□□ -0.47
GCN1-201ENST00000300648 KIF17Q9P2E2 1029 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 STXBP3O00186 592 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 COPEO14579 308 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 XKR9Q5GH70 373 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 C1orf146Q5VVC0 180 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 NUGGCQ68CJ6 796 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 RMDN2Q96LZ7 410 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 TRPV6Q9H1D0 765 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 CALB1P05937 261 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 RCAN1P53805 252 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 ELMSAN1Q6PJG2 1045 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 TERB1Q8NA31 727 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 RNF169Q8NCN4 708 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 SLC8A2Q9UPR5 921 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 GTPBP10A4D1E9 387 aaKnown RBP12.11□□□□□ -0.47
GCN1-201ENST00000300648 HSPA4LO95757 839 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 C4BPBP20851 252 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 RBL2Q08999 1139 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 SLC39A6Q13433 755 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 KAZNQ674X7 775 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 PARP9Q8IXQ6 854 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 ATP6V0A4Q9HBG4 840 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 DISC1Q9NRI5 854 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 WARS2Q9UGM6 360 aaKnown RBP12.11□□□□□ -0.47
GCN1-201ENST00000300648 PCDHA13Q9Y5I0 950 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 CDK12Q9NYV4 1490 aaPredicted RBP12.11□□□□□ -0.47
GCN1-201ENST00000300648 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
GCN1-201ENST00000300648 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
GCN1-201ENST00000300648 PLEKHG2Q9H7P9 1386 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 ASAP2O43150 1006 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 IL1RL1Q01638 556 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 DARS2Q6PI48 645 aaKnown RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 TRMT10CQ7L0Y3 403 aaKnown RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 ANLNQ9NQW6 1124 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 DBNLQ9UJU6 430 aaKnown RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 A2ML1A8K2U0 1454 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 DLATP10515 647 aaKnown RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 NCF2P19878 526 aaPredicted RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 XPAP23025 273 aaPredicted RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 DEFA1P59665 94 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 DEFA3P59666 94 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 USH1GQ495M9 461 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 SLFN12LQ6IEE8 588 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 ARMCX2Q7L311 632 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 SLC7A3Q8WY07 619 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 GPBP1L1Q9HC44 474 aaPredicted RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 NPR1P16066 1061 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 ZNF219Q9P2Y4 722 aaPredicted RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 PPP2R2AP63151 447 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 TRIM67Q6ZTA4 783 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 DTX3LQ8TDB6 740 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 JARID2Q92833 1246 aaPredicted RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 AMNQ9BXJ7 453 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 SLITRK6Q9H5Y7 841 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms