RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ADCY1Q08828 1119 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 LRIG3Q6UXM1 1119 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 REXO1Q8N1G1 1221 aaKnown RBP16■□□□□ 0.15
COL6A2-201ENST00000300527 CCDC26Q8TAB7 109 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 KCNV2Q8TDN2 545 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 PRCCQ92733 491 aaPredicted RBP16■□□□□ 0.15
COL6A2-201ENST00000300527 PNMA5Q96PV4 448 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 NFS1Q9Y697 457 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 CCT8L1PA6NM43 557 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 GNAQP50148 359 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 LRRC63Q05C16 580 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 COASYQ13057 564 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 ADAM9Q13443 819 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 GJB7Q6PEY0 223 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 SMIM5Q71RC9 77 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 ZNF571Q7Z3V5 609 aaPredicted RBP16■□□□□ 0.15
COL6A2-201ENST00000300527 MAPKAPK5Q8IW41 473 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 FMO2Q99518 471 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 PRMT1Q99873 361 aaKnown RBP16■□□□□ 0.15
COL6A2-201ENST00000300527 PLCD4Q9BRC7 762 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 FAM167BQ9BTA0 163 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 BMP2KQ9NSY1 1161 aaPredicted RBP16■□□□□ 0.15
COL6A2-201ENST00000300527 NR2E1Q9Y466 385 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 KCPQ6ZWJ8 1503 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 MTMR3Q13615 1198 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 ZKSCAN8Q15776 578 aaPredicted RBP16■□□□□ 0.15
COL6A2-201ENST00000300527 NSUN4Q96CB9 384 aaKnown RBP16■□□□□ 0.15
COL6A2-201ENST00000300527 SPDL1Q96EA4 605 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 TMEM47Q9BQJ4 181 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 MAGEF1Q9HAY2 307 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 PCDHGC5Q9Y5F6 944 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 BAZ2AQ9UIF9 1905 aaKnown RBP16■□□□□ 0.15
COL6A2-201ENST00000300527 C21orf2O43822 256 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 ORC4O43929 436 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 IFI35P80217 286 aaPredicted RBP15.99■□□□□ 0.15
COL6A2-201ENST00000300527 WLSQ5T9L3 541 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 TMC3Q7Z5M5 1100 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 TGFBRAP1Q8WUH2 860 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 FAM84BQ96KN1 310 aaPredicted RBP15.99■□□□□ 0.15
COL6A2-201ENST00000300527 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.99■□□□□ 0.15
COL6A2-201ENST00000300527 INTS9Q9NV88 658 aaKnown RBP15.99■□□□□ 0.15
COL6A2-201ENST00000300527 E9PMD0 336 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 F8W031 263 aaPredicted RBP15.99■□□□□ 0.15
COL6A2-201ENST00000300527 RGS16O15492 202 aaPredicted RBP15.99■□□□□ 0.15
COL6A2-201ENST00000300527 ZNF34Q8IZ26 560 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 CUL5Q93034 780 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 ACSBG1Q96GR2 724 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 PAGR1Q9BTK6 254 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 MTFR1LQ9H019 292 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 SWAP70Q9UH65 585 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 ADAMTS7Q9UKP4 1686 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 F8VZ95 297 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 LAD1O00515 517 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 DIAPH2O60879 1101 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 MYBL1P10243 752 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 USP11P51784 963 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 MAP2K1Q02750 393 aaPredicted RBP15.99■□□□□ 0.15
COL6A2-201ENST00000300527 KCNH2Q12809 1159 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 DIXDC1Q155Q3 683 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 UBE2SQ16763 222 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 ANKRD42Q8N9B4 389 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 CCT6BQ92526 530 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 ABCF3Q9NUQ8 709 aa15.99■□□□□ 0.15
COL6A2-201ENST00000300527 ENO4A6NNW6 628 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 GNA11P29992 359 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 GRM4Q14833 912 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 C3orf67Q6ZVT6 689 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 SH3GLB2Q9NR46 395 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 ANP32DO95626 131 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 PRPHP41219 470 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 KCNJ2P63252 427 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 DENND2CQ68D51 928 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 RAD54LQ92698 747 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 ARPP21Q9UBL0 812 aaPredicted RBP15.98■□□□□ 0.15
COL6A2-201ENST00000300527 GFPT2O94808 682 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 PBKQ96KB5 322 aa15.98■□□□□ 0.15
COL6A2-201ENST00000300527 A8MUI8 341 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 ADAMTS2O95450 1211 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 NR2F2P24468 414 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 UBAP2Q5T6F2 1119 aaKnown RBP15.97■□□□□ 0.15
COL6A2-201ENST00000300527 FMNL3Q8IVF7 1028 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 OSGEPQ9NPF4 335 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 DBR1Q9UK59 544 aaKnown RBP15.97■□□□□ 0.15
COL6A2-201ENST00000300527 CHD4Q14839 1912 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 H2AFZP0C0S5 128 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 FGFR4P22455 802 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
COL6A2-201ENST00000300527 TRIM68Q6AZZ1 485 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 H2AFVQ71UI9 128 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 NUCKS1Q9H1E3 243 aaKnown RBP15.97■□□□□ 0.15
COL6A2-201ENST00000300527 GPCPD1Q9NPB8 672 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.97■□□□□ 0.151e-7■■■■■ 115.4
COL6A2-201ENST00000300527 DNAJC17Q9NVM6 304 aaKnown RBP15.97■□□□□ 0.15
COL6A2-201ENST00000300527 CHORDC1Q9UHD1 332 aaPredicted RBP15.97■□□□□ 0.15
COL6A2-201ENST00000300527 KIAA1024Q9UPX6 916 aa15.97■□□□□ 0.15
COL6A2-201ENST00000300527 M0R2N6 131 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 CCNHP51946 323 aaPredicted RBP15.96■□□□□ 0.15
COL6A2-201ENST00000300527 ECM1Q16610 540 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 IFI16Q16666 785 aaKnown RBP15.96■□□□□ 0.15
COL6A2-201ENST00000300527 AGBL2Q5U5Z8 902 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms