RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TLCD1Q96CP7 247 aa14.21□□□□□ -0.13
TVP23A-201ENST00000299866 INTS9Q9NV88 658 aaKnown RBP14.21□□□□□ -0.13
TVP23A-201ENST00000299866 ZBTB1Q9Y2K1 713 aa14.21□□□□□ -0.13
TVP23A-201ENST00000299866 BAZ2AQ9UIF9 1905 aaKnown RBP14.2□□□□□ -0.14
TVP23A-201ENST00000299866 A8MUI8 341 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 STXBP3O00186 592 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 CYTH3O43739 400 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 UBOX5O94941 541 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 SLCO1A2P46721 670 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 NONOQ15233 471 aaKnown RBP eCLIP14.2□□□□□ -0.14
TVP23A-201ENST00000299866 CAPRIN2Q6IMN6 1127 aaKnown RBP14.2□□□□□ -0.14
TVP23A-201ENST00000299866 DDX12PQ92771 950 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 ZNF570Q96NI8 536 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 FAM167BQ9BTA0 163 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 VAT1LQ9HCJ6 419 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 NOP53Q9NZM5 478 aaKnown RBP14.2□□□□□ -0.14
TVP23A-201ENST00000299866 TRHP20396 242 aaPredicted RBP14.2□□□□□ -0.14
TVP23A-201ENST00000299866 FKBP3Q00688 224 aaKnown RBP14.2□□□□□ -0.14
TVP23A-201ENST00000299866 MYOCDQ8IZQ8 938 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 SYN2Q92777 582 aaPredicted RBP14.2□□□□□ -0.14
TVP23A-201ENST00000299866 NLRP3Q96P20 1036 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 BATF3Q9NR55 127 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 NR2E1Q9Y466 385 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 MYH7BA7E2Y1 1941 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 SPDYE3A6NKU9 549 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 UPP2O95045 317 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 FGRP09769 529 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 ALDH5A1P51649 535 aaPredicted RBP14.2□□□□□ -0.14
TVP23A-201ENST00000299866 ZNF571Q7Z3V5 609 aaPredicted RBP14.2□□□□□ -0.14
TVP23A-201ENST00000299866 HOOK3Q86VS8 718 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 DZIP3Q86Y13 1208 aaKnown RBP14.2□□□□□ -0.14
TVP23A-201ENST00000299866 YIPF3Q9GZM5 350 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 BIN2Q9UBW5 565 aaPredicted RBP14.2□□□□□ -0.14
TVP23A-201ENST00000299866 DUOX1Q9NRD9 1551 aa14.2□□□□□ -0.14
TVP23A-201ENST00000299866 POTEMA6NI47 508 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 KIF3CO14782 793 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 CRELD2Q6UXH1 353 aaPredicted RBP14.19□□□□□ -0.14
TVP23A-201ENST00000299866 PIGWQ7Z7B1 504 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 MGARPQ8TDB4 240 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 ZNF384Q8TF68 577 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 CALR3Q96L12 384 aaKnown RBP14.19□□□□□ -0.14
TVP23A-201ENST00000299866 PNMA5Q96PV4 448 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 UIMC1Q96RL1 719 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 NUDT12Q9BQG2 462 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 ECT2Q9H8V3 914 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 DCP1AQ9NPI6 582 aaPredicted RBP14.19□□□□□ -0.14
TVP23A-201ENST00000299866 FAM114A2Q9NRY5 505 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 SPATS2LQ9NUQ6 558 aaKnown RBP14.19□□□□□ -0.14
TVP23A-201ENST00000299866 BARHL2Q9NY43 387 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 ABCB11O95342 1321 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 PVALEFA0A1B0GWK0 134 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 USP17L3A6NCW0 530 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 USP17L4A6NCW7 530 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 SMCO2A6NFE2 343 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 CCDC188H7C350 402 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 IGF2BP3O00425 579 aaKnown RBP eCLIP14.19□□□□□ -0.14
TVP23A-201ENST00000299866 RGS16O15492 202 aaPredicted RBP14.19□□□□□ -0.14
TVP23A-201ENST00000299866 FGGP02679 453 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 GSTA1P08263 222 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 NQO1P15559 274 aaKnown RBP14.19□□□□□ -0.14
TVP23A-201ENST00000299866 PLTPP55058 493 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 CCDC38Q502W7 563 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 COBLL1Q53SF7 1204 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 ALKBH5Q6P6C2 394 aaKnown RBP14.19□□□□□ -0.14
TVP23A-201ENST00000299866 MAEAQ7L5Y9 396 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 USP17L1Q7RTZ2 530 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 NEK8Q86SG6 692 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 KCNV2Q8TDN2 545 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 TBCKQ8TEA7 893 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 SAAL1Q96ER3 474 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 ASAP2O43150 1006 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
TVP23A-201ENST00000299866 ITIH4Q14624 930 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 SUSD4Q5VX71 490 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 KCNK18Q7Z418 384 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 EGFL6Q8IUX8 553 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 TPCN2Q8NHX9 752 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 ATXN2LQ8WWM7 1075 aaKnown RBP14.19□□□□□ -0.14
TVP23A-201ENST00000299866 PIGBQ92521 554 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 ZBTB10Q96DT7 871 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 L3MBTL3Q96JM7 780 aaPredicted RBP14.19□□□□□ -0.14
TVP23A-201ENST00000299866 ZMYND12Q9H0C1 365 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 STX8Q9UNK0 236 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 JAG2Q9Y219 1238 aa14.19□□□□□ -0.14
TVP23A-201ENST00000299866 CFAP73A6NFT4 308 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 PCP11498 1178 aaKnown RBP14.18□□□□□ -0.14
TVP23A-201ENST00000299866 EIF3BP55884 814 aaKnown RBP14.18□□□□□ -0.14
TVP23A-201ENST00000299866 LRRC14Q15048 493 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 IFI16Q16666 785 aaKnown RBP14.18□□□□□ -0.14
TVP23A-201ENST00000299866 DENND2CQ68D51 928 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 LRRC57Q8N9N7 239 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 RNF217Q8TC41 542 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 GLG1Q92896 1179 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 CENPTQ96BT3 561 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 DYNLL2Q96FJ2 89 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 FGFBP2Q9BYJ0 223 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 MCM9Q9NXL9 1143 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 MAD2L2Q9UI95 211 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 SNX24Q9Y343 169 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 USP17L8P0C7I0 530 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms