RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ZSWIM4Q9H7M6 989 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 PDGFCQ9NRA1 345 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 TNPO2O14787 897 aaKnown RBP27.51■■□□□ 1.99
GTF2A1-201ENST00000298173 ECM2O94769 699 aaPredicted RBP27.51■■□□□ 1.99
GTF2A1-201ENST00000298173 TBC1D8O95759 1140 aa27.51■■□□□ 1.99
GTF2A1-201ENST00000298173 IGHA2P01877 340 aa27.51■■□□□ 1.99
GTF2A1-201ENST00000298173 ACTR2P61160 394 aa27.51■■□□□ 1.99
GTF2A1-201ENST00000298173 LACTBP83111 547 aaPredicted RBP27.51■■□□□ 1.99
GTF2A1-201ENST00000298173 DHX8Q14562 1220 aaKnown RBP27.51■■□□□ 1.99
GTF2A1-201ENST00000298173 DPCR1Q3MIW9 517 aa27.51■■□□□ 1.99
GTF2A1-201ENST00000298173 ISM2Q6H9L7 571 aa27.51■■□□□ 1.99
GTF2A1-201ENST00000298173 RNF186Q9NXI6 227 aa27.51■■□□□ 1.99
GTF2A1-201ENST00000298173 CAVIN2O95810 425 aa27.5■■□□□ 1.99
GTF2A1-201ENST00000298173 RPN1P04843 607 aaKnown RBP27.5■■□□□ 1.99
GTF2A1-201ENST00000298173 SCFD2Q8WU76 684 aa27.5■■□□□ 1.99
GTF2A1-201ENST00000298173 SOCS4Q8WXH5 440 aa27.5■■□□□ 1.99
GTF2A1-201ENST00000298173 DNAJC25Q9H1X3 360 aa27.5■■□□□ 1.99
GTF2A1-201ENST00000298173 LOXHD1Q8IVV2 1947 aa27.5■■□□□ 1.99
GTF2A1-201ENST00000298173 ZBTB39O15060 712 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 TTLL4Q14679 1199 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 KCNB1Q14721 858 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 METTL7BQ6UX53 244 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 C11orf57Q6ZUT1 292 aaPredicted RBP27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 C4orf19Q8IY42 314 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 THSD7BQ9C0I4 1608 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 GGPS1O95749 300 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 XRCC6P12956 609 aaKnown RBP eCLIP27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 RGS2P41220 211 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 PSMC5P62195 406 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 CELF3Q5SZQ8 465 aaKnown RBP27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 PIGOQ8TEQ8 1089 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 DNAJC19Q96DA6 116 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 ABHD16BQ9H3Z7 469 aa27.49■■□□□ 1.99
GTF2A1-201ENST00000298173 PSAPP07602 524 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 TXNP10599 105 aaKnown RBP27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 CYP11B2P19099 503 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 PSMC4P43686 418 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 FCGRTP55899 365 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 UGCGQ16739 394 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 ARSHQ5FYA8 562 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 DDX12PQ92771 950 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 TRIM47Q96LD4 638 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 ARHGAP39Q9C0H5 1083 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 BHMT2Q9H2M3 363 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 FLRT1Q9NZU1 646 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 ZSWIM8A7E2V4 1837 aa27.48■■□□□ 1.99
GTF2A1-201ENST00000298173 IGKV6D-21A0A0A0MT36 114 aa27.47■■□□□ 1.99
GTF2A1-201ENST00000298173 GSTTP1A0A1W2PQM5 241 aa27.47■■□□□ 1.99
GTF2A1-201ENST00000298173 TRPA1O75762 1119 aa27.47■■□□□ 1.99
GTF2A1-201ENST00000298173 IRF5Q13568 498 aa27.47■■□□□ 1.99
GTF2A1-201ENST00000298173 TMEM63BQ5T3F8 832 aa27.47■■□□□ 1.99
GTF2A1-201ENST00000298173 OLFML2BQ68BL8 750 aa27.47■■□□□ 1.99
GTF2A1-201ENST00000298173 FAM200AQ8TCP9 573 aa27.47■■□□□ 1.99
GTF2A1-201ENST00000298173 MYH9P35579 1960 aaKnown RBP27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 PVALEFA0A1B0GWK0 134 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 SORBS3O60504 671 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 RHOBTB3O94955 611 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 SUPT20HL2P0C7V6 817 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 CYP2B6P20813 491 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 SP3Q02447 781 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 KMT5BQ4FZB7 885 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 MIS18BP1Q6P0N0 1132 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 RMND1Q9NWS8 449 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 ZNF165P49910 485 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 SP4Q02446 784 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 ACVR2BQ13705 512 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 SWSAP1Q6NVH7 229 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 GPBP1Q86WP2 473 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 APBA2Q99767 749 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 MLXIPQ9HAP2 919 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 GRPEL1Q9HAV7 217 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 GABBR1Q9UBS5 961 aa27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 DBR1Q9UK59 544 aaKnown RBP27.46■■□□□ 1.99
GTF2A1-201ENST00000298173 STBD1O95210 358 aa27.45■■□□□ 1.98
GTF2A1-201ENST00000298173 SSBP05455 408 aaKnown RBP eCLIP27.45■■□□□ 1.98
GTF2A1-201ENST00000298173 ASIC1P78348 528 aa27.45■■□□□ 1.98
GTF2A1-201ENST00000298173 CAP1Q01518 475 aa27.45■■□□□ 1.98
GTF2A1-201ENST00000298173 UNC13DQ70J99 1090 aa27.45■■□□□ 1.98
GTF2A1-201ENST00000298173 DYMQ7RTS9 669 aa27.45■■□□□ 1.98
GTF2A1-201ENST00000298173 CCDC60Q8IWA6 550 aaPredicted RBP27.45■■□□□ 1.98
GTF2A1-201ENST00000298173 MLKLQ8NB16 471 aa27.45■■□□□ 1.98
GTF2A1-201ENST00000298173 RNF214Q8ND24 703 aa27.45■■□□□ 1.98
GTF2A1-201ENST00000298173 BMP2KQ9NSY1 1161 aaPredicted RBP27.45■■□□□ 1.98
GTF2A1-201ENST00000298173 ZNF862O60290 1169 aa27.44■■□□□ 1.98
GTF2A1-201ENST00000298173 XRCC5P13010 732 aaKnown RBP27.44■■□□□ 1.98
GTF2A1-201ENST00000298173 EHHADHQ08426 723 aa27.44■■□□□ 1.98
GTF2A1-201ENST00000298173 IQCB1Q15051 598 aa27.44■■□□□ 1.98
GTF2A1-201ENST00000298173 CCL14Q16627 93 aa27.44■■□□□ 1.98
GTF2A1-201ENST00000298173 RINT1Q6NUQ1 792 aa27.44■■□□□ 1.98
GTF2A1-201ENST00000298173 SEPT1Q8WYJ6 367 aa27.44■■□□□ 1.98
GTF2A1-201ENST00000298173 COPS5Q92905 334 aa27.44■■□□□ 1.98
GTF2A1-201ENST00000298173 BPIFA3Q9BQP9 254 aa27.44■■□□□ 1.98
GTF2A1-201ENST00000298173 CBX8Q9HC52 389 aa27.44■■□□□ 1.98
GTF2A1-201ENST00000298173 MAFBQ9Y5Q3 323 aaPredicted RBP27.44■■□□□ 1.98
GTF2A1-201ENST00000298173 MRE11P49959 708 aa27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 ZNF658Q5TYW1 1059 aaPredicted RBP27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 C1orf186Q6ZWK4 172 aa27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 DHX37Q8IY37 1157 aaKnown RBP27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 ATP6V0A1Q93050 837 aa27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 GPR20Q99678 358 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms