RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 MB21D1Q8N884 522 aa15.83■□□□□ 0.12
C9orf3-202ENST00000297979 REEP2Q9BRK0 252 aa15.83■□□□□ 0.12
C9orf3-202ENST00000297979 PCDHA2Q9Y5H9 948 aa15.83■□□□□ 0.12
C9orf3-202ENST00000297979 PPIL2Q13356 520 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 LRRC41Q15345 812 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 FOXR2Q6PJQ5 311 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 ARMC9Q7Z3E5 817 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 GLIS3Q8NEA6 775 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 CCDC112Q8NEF3 446 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 NSUN6Q8TEA1 469 aaKnown RBP15.82■□□□□ 0.12
C9orf3-202ENST00000297979 TBC1D22BQ9NU19 505 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 KCNH4Q9UQ05 1017 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 ITIH6Q6UXX5 1313 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 LOXHD1Q8IVV2 1947 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 TESPA1A2RU30 521 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-202ENST00000297979 CHST13Q8NET6 341 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 PIGOQ8TEQ8 1089 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 NACC1Q96RE7 527 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 LXNQ9BS40 222 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 RUSC1Q9BVN2 902 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 ZHX3Q9H4I2 956 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 TBC1D7Q9P0N9 293 aa15.82■□□□□ 0.12
C9orf3-202ENST00000297979 MAFGO15525 162 aa15.81■□□□□ 0.12
C9orf3-202ENST00000297979 NR3C2P08235 984 aa15.81■□□□□ 0.12
C9orf3-202ENST00000297979 VSIG10LQ86VR7 867 aa15.81■□□□□ 0.12
C9orf3-202ENST00000297979 TSG101Q99816 390 aa15.81■□□□□ 0.12
C9orf3-202ENST00000297979 KIF20AO95235 890 aa15.81■□□□□ 0.12
C9orf3-202ENST00000297979 CNOT6LQ96LI5 555 aaKnown RBP15.81■□□□□ 0.12
C9orf3-202ENST00000297979 WRAP73Q9P2S5 460 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-202ENST00000297979 LGALS16A8MUM7 142 aa15.81■□□□□ 0.12
C9orf3-202ENST00000297979 TBCAO75347 108 aaKnown RBP15.81■□□□□ 0.12
C9orf3-202ENST00000297979 FGFR1OPO95684 399 aaKnown RBP15.81■□□□□ 0.12
C9orf3-202ENST00000297979 RINT1Q6NUQ1 792 aa15.81■□□□□ 0.12
C9orf3-202ENST00000297979 BANK1Q8NDB2 785 aa15.81■□□□□ 0.12
C9orf3-202ENST00000297979 GPRASP2Q96D09 838 aa15.81■□□□□ 0.12
C9orf3-202ENST00000297979 FGFBP2Q9BYJ0 223 aa15.81■□□□□ 0.12
C9orf3-202ENST00000297979 TPM2P07951 284 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 GOLGA8FQ08AF8 430 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 GOLGA8DPQ0D2H9 430 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 NLRX1Q86UT6 975 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 OPTNQ96CV9 577 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 BTBD7Q9P203 1132 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 AGTPBP1Q9UPW5 1226 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 SH3BP1Q9Y3L3 701 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 P4HBP07237 508 aaKnown RBP15.8■□□□□ 0.12
C9orf3-202ENST00000297979 PPFIBP1Q86W92 1011 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 SFR1Q86XK3 245 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 RIOX2Q8IUF8 465 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 TC2NQ8N9U0 490 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 EEF2KMTQ96G04 330 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 INPP4AQ96PE3 977 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-202ENST00000297979 TUBGCP2Q9BSJ2 902 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 TMX1Q9H3N1 280 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 FBXO40Q9UH90 709 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 LCTP09848 1927 aa15.8■□□□□ 0.12
C9orf3-202ENST00000297979 KCNJ6P48051 423 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 UBXN1Q04323 297 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 C1orf186Q6ZWK4 172 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 SCFD1Q8WVM8 642 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 KCND2Q9NZV8 630 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 TCEAL9Q9UHQ7 104 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 SAMM50Q9Y512 469 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.79■□□□□ 0.12
C9orf3-202ENST00000297979 COL4A3BPQ9Y5P4 624 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 MTIF2P46199 727 aaKnown RBP15.79■□□□□ 0.12
C9orf3-202ENST00000297979 ZCWPW2Q504Y3 356 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 ASCC2Q9H1I8 757 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-202ENST00000297979 ZSWIM4Q9H7M6 989 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 CLEC11AQ9Y240 323 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 PFASO15067 1338 aa15.79■□□□□ 0.12
C9orf3-202ENST00000297979 SRCAPQ6ZRS2 3230 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 RSPH10B2B2RC85 870 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 AKR1B15C9JRZ8 316 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-202ENST00000297979 ZBTB39O15060 712 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 ATP9AO75110 1047 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 STAM2O75886 525 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 RSPH10BP0C881 870 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 GAP43P17677 238 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 ADKP55263 362 aaKnown RBP15.78■□□□□ 0.12
C9orf3-202ENST00000297979 KRT76Q01546 638 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 DNTTIP2Q5QJE6 756 aaKnown RBP15.78■□□□□ 0.12
C9orf3-202ENST00000297979 LDLRAD1Q5T700 205 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 LRRC55Q6ZSA7 311 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 SPATC1LQ9H0A9 340 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 PES1O00541 588 aaKnown RBP15.78■□□□□ 0.12
C9orf3-202ENST00000297979 JAK3P52333 1124 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 HERVK_113P62684 666 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 TRIM14Q14142 442 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 NELFCDQ8IXH7 590 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 ANKRD35Q8N283 1001 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 KCND1Q9NSA2 647 aa15.78■□□□□ 0.12
C9orf3-202ENST00000297979 ARHGEF35A5YM69 484 aa15.77■□□□□ 0.12
C9orf3-202ENST00000297979 WDR64B1ANS9 1081 aa15.77■□□□□ 0.12
C9orf3-202ENST00000297979 PEX10O60683 326 aa15.77■□□□□ 0.12
C9orf3-202ENST00000297979 TPM1P09493 284 aa15.77■□□□□ 0.12
C9orf3-202ENST00000297979 SFNP31947 248 aa15.77■□□□□ 0.12
C9orf3-202ENST00000297979 QARSP47897 775 aaKnown RBP15.77■□□□□ 0.12
C9orf3-202ENST00000297979 DNM2P50570 870 aa15.77■□□□□ 0.12
C9orf3-202ENST00000297979 RBL2Q08999 1139 aa15.77■□□□□ 0.12
C9orf3-202ENST00000297979 FASTKD5Q7L8L6 764 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms