RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 KRT6AP02538 564 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 KRT6BP04259 564 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 HMOX2P30519 316 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 PPP1R2P41236 205 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 ZNF827Q17R98 1081 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 PARP10Q53GL7 1025 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 RABGAP1LQ5R372 815 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 PPP1R2P3Q6NXS1 205 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 RNF19BQ6ZMZ0 732 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 C2CD5Q86YS7 1000 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 LRRC34Q8IZ02 419 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 PGBD1Q96JS3 809 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 LLPHQ9BRT6 129 aaKnown RBP12.63□□□□□ -0.39
SNIP1-201ENST00000296215 ZMYND8Q9ULU4 1186 aaPredicted RBP12.63□□□□□ -0.39
SNIP1-201ENST00000296215 PHF24Q9UPV7 400 aa12.63□□□□□ -0.39
SNIP1-201ENST00000296215 EEF1B2P24534 225 aaKnown RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 ADAM9Q13443 819 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 BYSLQ13895 437 aaKnown RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 IZUMO2Q6UXV1 221 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 SMYD1Q8NB12 490 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 RPGRQ92834 1020 aaKnown RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 TGS1Q96RS0 853 aaKnown RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 DDX50Q9BQ39 737 aaKnown RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 PCDHA5Q9Y5H7 936 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 ZNF18P17022 549 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 PRKACBP22694 351 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 RPS6KB1P23443 525 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 CMA1P23946 247 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 CHKAP35790 457 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 PGM1P36871 562 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 FNTAP49354 379 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 PPP2R5EQ16537 467 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 AGBL2Q5U5Z8 902 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 DNAJC14Q6Y2X3 702 aaPredicted RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 TRIM56Q9BRZ2 755 aaKnown RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 TM6SF1Q9BZW5 370 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 C8orf4Q9NR00 106 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 METTL5Q9NRN9 209 aaKnown RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 PDLIM1O00151 329 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 DDX58O95786 925 aaKnown RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 MAP4P27816 1152 aaKnown RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 KCNJ2P63252 427 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 PEX26Q7Z412 305 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 CATSPER3Q86XQ3 398 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 GPIHBP1Q8IV16 184 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 U2AF1L4Q8WU68 220 aaKnown RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 FERMT2Q96AC1 680 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 MCRS1Q96EZ8 462 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 NOC4LQ9BVI4 516 aaKnown RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 GGNBP2Q9H3C7 697 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 ZHX3Q9H4I2 956 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 TRIM39Q9HCM9 518 aa12.62□□□□□ -0.39
SNIP1-201ENST00000296215 PACSIN2Q9UNF0 486 aaPredicted RBP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNIP1-201ENST00000296215 CCDC22O60826 627 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 APOA1P02647 267 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 KRT18P05783 430 aaKnown RBP12.61□□□□□ -0.39
SNIP1-201ENST00000296215 PTDSS1P48651 473 aaKnown RBP12.61□□□□□ -0.39
SNIP1-201ENST00000296215 PLTPP55058 493 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 NT5C3AQ9H0P0 336 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 DAPK2Q9UIK4 370 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 KIF24Q5T7B8 1368 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 BIRC5O15392 142 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 MFN2O95140 757 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 ASMTLO95671 621 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 MCM7P33993 719 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 GNAQP50148 359 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 PLCD1P51178 756 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 MKRN3Q13064 507 aaKnown RBP12.61□□□□□ -0.39
SNIP1-201ENST00000296215 UBN1Q9NPG3 1134 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 TRNAU1APQ9NX07 287 aaKnown RBP12.61□□□□□ -0.39
SNIP1-201ENST00000296215 SLC5A4Q9NY91 659 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 ASIC3Q9UHC3 531 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 MAPK8IP1Q9UQF2 711 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 GOLGA8RI6L899 631 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 PER1O15534 1290 aaPredicted RBP12.61□□□□□ -0.39
SNIP1-201ENST00000296215 ORC4O43929 436 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 FCHO2Q0JRZ9 810 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 PAK1Q13153 545 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 LIN52Q52LA3 116 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 PLEKHA7Q6IQ23 1121 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 SLC26A7Q8TE54 656 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 IFT122Q9HBG6 1241 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 TIMMDC1Q9NPL8 285 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 COPB2P35606 906 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 ADAM17P78536 824 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 NONOQ15233 471 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNIP1-201ENST00000296215 FHOD3Q2V2M9 1422 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 OR2W6PQ8NHA6 318 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 MDM1Q8TC05 714 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 BORCS6Q96GS4 357 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 AZI2Q9H6S1 392 aa12.61□□□□□ -0.39
SNIP1-201ENST00000296215 CFAP69A5D8W1 941 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 ZNF839A8K0R7 811 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 PSMD14O00487 310 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 IL4RP24394 825 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 BPIFB4P59827 614 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 CLUL1Q15846 466 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 FXNQ16595 210 aa12.6□□□□□ -0.39
SNIP1-201ENST00000296215 MYO1HQ8N1T3 1032 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms