RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 FNTAP49354 379 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 KLK7P49862 253 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 USP11P51784 963 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 KRT79Q5XKE5 535 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 C6orf89Q6UWU4 347 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 C3orf67Q6ZVT6 689 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 CROCCP2Q86T23 111 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 TBCKQ8TEA7 893 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 LRRC45Q96CN5 670 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 ATP6V1G3Q96LB4 118 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 RUFY1Q96T51 708 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 KCTD10Q9H3F6 313 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 DEF6Q9H4E7 631 aa6.78□□□□□ -1.32
VCAM1-201ENST00000294728 BAZ2BQ9UIF8 2168 aaKnown RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 MACROD2A1Z1Q3 448 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 MEFVO15553 781 aaPredicted RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 TLR2O60603 784 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 FAM107AO95990 144 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 USP17L8P0C7I0 530 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 HADHBP55084 474 aaKnown RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 CYP27A1Q02318 531 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 GABPAQ06546 454 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 DEFB115Q30KQ5 88 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 FAM83BQ5T0W9 1011 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 CFAP58Q5T655 872 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 ZNF804AQ7Z570 1209 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 PNMA8AQ86V59 439 aaPredicted RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 LRRC57Q8N9N7 239 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 TBC1D22AQ8WUA7 517 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 LMBR1Q8WVP7 490 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 VTI1AQ96AJ9 217 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 MASTLQ96GX5 879 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 CAPZA3Q96KX2 299 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 ZIM3Q96PE6 472 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 ACTR5Q9H9F9 607 aaPredicted RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 TMBIM4Q9HC24 238 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 BMP2KQ9NSY1 1161 aaPredicted RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 RBM12Q9NTZ6 932 aaKnown RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 HACL1Q9UJ83 578 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 ZNF646O15015 1829 aaPredicted RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 PNMA6FA0A0J9YX94 578 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 H0YGN5 161 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 EPHB6O15197 1021 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 ERLIN2O94905 339 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 UBE4BO95155 1302 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 MUTP22033 750 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 GBP1P32455 592 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 CDK8P49336 464 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 ADCY7P51828 1080 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 GSCP56915 257 aaPredicted RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 ITGB3BPQ13352 177 aaPredicted RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 NFRKBQ6P4R8 1299 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 TPTE2Q6XPS3 522 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 RUFY4Q6ZNE9 571 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 RRAGAQ7L523 313 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 EPM2AIP1Q7L775 607 aaPredicted RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 CCDC65Q8IXS2 484 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 TSEN2Q8NCE0 465 aaKnown RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 BCAS4Q8TDM0 211 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 METTL14Q9HCE5 456 aaKnown RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 SUCLA2Q9P2R7 463 aaPredicted RBP6.77□□□□□ -1.33
VCAM1-201ENST00000294728 SYNPO2Q9UMS6 1093 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 STXBP5LQ9Y2K9 1186 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 NFS1Q9Y697 457 aa6.77□□□□□ -1.33
VCAM1-201ENST00000294728 ZNF541Q9H0D2 1346 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 ZNF233A6NK53 670 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 FZD9O00144 591 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 PPP1R37O75864 691 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 PLEKP08567 350 aaPredicted RBP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 TECP42680 631 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 DRG2P55039 364 aaKnown RBP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 NAP1L1P55209 391 aaKnown RBP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 EIF3BP55884 814 aaKnown RBP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 GNGT1P63211 74 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 COASYQ13057 564 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 GRAPQ13588 217 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 LETM2Q2VYF4 491 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 GPATCH4Q5T3I0 446 aaKnown RBP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 CACNA2D4Q7Z3S7 1137 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 TMC4Q7Z404 712 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 SYCE1Q8N0S2 351 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 GRAPLQ8TC17 118 aaPredicted RBP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 RASGRP4Q8TDF6 673 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 SH3RF3Q8TEJ3 882 aaPredicted RBP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 CRYGNQ8WXF5 182 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 DDX12PQ92771 950 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 ZNF622Q969S3 477 aaKnown RBP eCLIP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 EYA3Q99504 573 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 MLXIPQ9HAP2 919 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 KCNMB3Q9NPA1 279 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 SALL4Q9UJQ4 1053 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 NCANO14594 1321 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 PDXKO00764 312 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 COBLO75128 1261 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 PHACTR2O75167 634 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 PDHBP11177 359 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 RFX1P22670 979 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 ECHS1P30084 290 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 LSP1P33241 339 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms