RNA–Protein interactions for RNA: ENST00000293861.7

SNRNP25-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNRNP25, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-201ENST00000293861 CSADQ9Y600 493 aa23.82■■□□□ 1.4
SNRNP25-201ENST00000293861 PHLPP2Q6ZVD8 1323 aa23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 CTIFO43310 598 aaKnown RBP23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 MARSP56192 900 aaKnown RBP23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 RAD51AP2Q09MP3 1159 aa23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 EDRF1Q3B7T1 1238 aa23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 SNRNP48Q6IEG0 339 aaKnown RBP23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 RINT1Q6NUQ1 792 aa23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 CYP26C1Q6V0L0 522 aa23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 USP50Q70EL3 339 aaPredicted RBP23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 TPH2Q8IWU9 490 aa23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 OR8K1Q8NGG5 319 aa23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 NACC1Q96RE7 527 aa23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 NDST4Q9H3R1 872 aa23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 ADGRG1Q9Y653 693 aa23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 OTOFQ9HC10 1997 aa23.81■■□□□ 1.4
SNRNP25-201ENST00000293861 CHMP2AO43633 222 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 GNA14O95837 355 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 MRPS9P82933 396 aaKnown RBP23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 MTF1Q14872 753 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 PGM5Q15124 567 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 SYCP1Q15431 976 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 XRRA1Q6P2D8 792 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 ZC3H15Q8WU90 426 aaKnown RBP23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 RUSC1Q9BVN2 902 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 KCND2Q9NZV8 630 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 COL4A3BPQ9Y5P4 624 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 GAP43P17677 238 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 IREB2P48200 963 aaKnown RBP23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 BMT2Q1RMZ1 405 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 NSMFQ6X4W1 530 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 SYT10Q6XYQ8 523 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 SFR1Q86XK3 245 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 ZFP91Q96JP5 570 aaPredicted RBP23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 RMDN3Q96TC7 470 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 TEX13BQ9BXU2 312 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 PXMP2Q9NR77 195 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 OLFML3Q9NRN5 406 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 RIPK3Q9Y572 518 aa23.8■■□□□ 1.4
SNRNP25-201ENST00000293861 A0A1W2PQJ5 194 aa23.79■■□□□ 1.4
SNRNP25-201ENST00000293861 RASSF10A6NK89 507 aa23.79■■□□□ 1.4
SNRNP25-201ENST00000293861 TRAF5O00463 557 aa23.79■■□□□ 1.4
SNRNP25-201ENST00000293861 NKRFO15226 690 aaKnown RBP eCLIP23.79■■□□□ 1.4
SNRNP25-201ENST00000293861 DHX15O43143 795 aaKnown RBP23.79■■□□□ 1.4
SNRNP25-201ENST00000293861 ERVK-24P63145 666 aa23.79■■□□□ 1.4
SNRNP25-201ENST00000293861 TMEM132BQ14DG7 1078 aa23.79■■□□□ 1.4
SNRNP25-201ENST00000293861 C1orf186Q6ZWK4 172 aa23.79■■□□□ 1.4
SNRNP25-201ENST00000293861 PDCD2LQ9BRP1 358 aa23.79■■□□□ 1.4
SNRNP25-201ENST00000293861 AGO4Q9HCK5 861 aaKnown RBP23.79■■□□□ 1.4
SNRNP25-201ENST00000293861 EIF2AK2P19525 551 aaKnown RBP23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 ZHX3Q9H4I2 956 aa23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 TRAF3IP3Q9Y228 551 aa23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 WDR81Q562E7 1941 aa23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 ZC3H4Q9UPT8 1303 aaKnown RBP23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 SPDYE16A6NNV3 312 aaPredicted RBP23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 TBCAO75347 108 aaKnown RBP23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 MTMR1Q13613 665 aa23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 BAATQ14032 418 aaPredicted RBP23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 PIGOQ8TEQ8 1089 aa23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 DESI2Q9BSY9 194 aa23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 KIAA1217Q5T5P2 1943 aa23.78■■□□□ 1.4
SNRNP25-201ENST00000293861 TRIM21P19474 475 aaKnown RBP23.77■■□□□ 1.4
SNRNP25-201ENST00000293861 NF2P35240 595 aa23.77■■□□□ 1.4
SNRNP25-201ENST00000293861 ZBED6P86452 979 aa23.77■■□□□ 1.4
SNRNP25-201ENST00000293861 ARHGEF16Q5VV41 709 aa23.77■■□□□ 1.4
SNRNP25-201ENST00000293861 NELFCDQ8IXH7 590 aa23.77■■□□□ 1.4
SNRNP25-201ENST00000293861 TBC1D22BQ9NU19 505 aa23.77■■□□□ 1.4
SNRNP25-201ENST00000293861 SIK3Q9Y2K2 1263 aa23.77■■□□□ 1.4
SNRNP25-201ENST00000293861 CASP5P51878 434 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 MEA1Q16626 185 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 KNOP1Q1ED39 458 aaKnown RBP23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 DLK2Q6UY11 383 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 LXNQ9BS40 222 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 ACAD9Q9H845 621 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 L2HGDHQ9H9P8 463 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 WRAP73Q9P2S5 460 aaPredicted RBP23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 RSPH10B2B2RC85 870 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 PDXKO00764 312 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 RSPH10BP0C881 870 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 EPHX2P34913 555 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 ITGB3BPQ13352 177 aaPredicted RBP23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 TSR1Q2NL82 804 aaKnown RBP23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 MIER3Q7Z3K6 550 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 SEL1LQ9UBV2 794 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 ODF2LQ9ULJ1 636 aa23.76■■□□□ 1.39
SNRNP25-201ENST00000293861 CCND2P30279 289 aa23.75■■□□□ 1.39
SNRNP25-201ENST00000293861 ZNF131P52739 623 aa23.75■■□□□ 1.39
SNRNP25-201ENST00000293861 MRPL44Q9H9J2 332 aaKnown RBP23.75■■□□□ 1.39
SNRNP25-201ENST00000293861 EIF3DO15371 548 aaKnown RBP eCLIP23.74■■□□□ 1.39
SNRNP25-201ENST00000293861 P4HBP07237 508 aaKnown RBP23.74■■□□□ 1.39
SNRNP25-201ENST00000293861 HOXD13P35453 343 aa23.74■■□□□ 1.39
SNRNP25-201ENST00000293861 PPATQ06203 517 aa23.74■■□□□ 1.39
SNRNP25-201ENST00000293861 CCDC40Q4G0X9 1142 aa23.74■■□□□ 1.39
SNRNP25-201ENST00000293861 WDR59Q6PJI9 974 aa23.74■■□□□ 1.39
SNRNP25-201ENST00000293861 TRIM59Q8IWR1 403 aa23.74■■□□□ 1.39
SNRNP25-201ENST00000293861 CDCA5Q96FF9 252 aa23.74■■□□□ 1.39
SNRNP25-201ENST00000293861 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.74■■□□□ 1.39
SNRNP25-201ENST00000293861 DNAI1Q9UI46 699 aa23.74■■□□□ 1.39
SNRNP25-201ENST00000293861 A0A0G2JMZ2 1700 aa23.74■■□□□ 1.39
SNRNP25-201ENST00000293861 SRCAPQ6ZRS2 3230 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms