RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 RPAINQ86UA6 219 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 CCDC12Q8WUD4 166 aaPredicted RBP11.93□□□□□ -0.5
SNF8-201ENST00000290330 ZBED2Q9BTP6 218 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 RNF26Q9BY78 433 aaPredicted RBP11.93□□□□□ -0.5
SNF8-201ENST00000290330 NCOA5Q9HCD5 579 aaKnown RBP11.93□□□□□ -0.5
SNF8-201ENST00000290330 C6orf50Q9HD87 102 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 PRDM6Q9NQX0 595 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 CYP46A1Q9Y6A2 500 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 IGLV3-22A0A075B6J6 115 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 EPOPA6NHQ4 379 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 ATG7O95352 703 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 CHRNA1P02708 482 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 CYP3A4P08684 503 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 INSRRP14616 1297 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 POU3F3P20264 500 aaPredicted RBP11.92□□□□□ -0.5
SNF8-201ENST00000290330 GNA11P29992 359 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 STAT5BP51692 787 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 AKAP17AQ02040 695 aaKnown RBP11.92□□□□□ -0.5
SNF8-201ENST00000290330 CCDC85BQ15834 202 aaPredicted RBP11.92□□□□□ -0.5
SNF8-201ENST00000290330 MCTP2Q6DN12 878 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 FAM117BQ6P1L5 589 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 PLPPR4Q7Z2D5 763 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 SPRED2Q7Z698 418 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 PLA2G4DQ86XP0 818 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 REXO1Q8N1G1 1221 aaKnown RBP11.92□□□□□ -0.5
SNF8-201ENST00000290330 ARNTL2Q8WYA1 636 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 SEPT8Q92599 483 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 RAD9AQ99638 391 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 SLC26A6Q9BXS9 759 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 TM6SF1Q9BZW5 370 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 AZI2Q9H6S1 392 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 TUBE1Q9UJT0 475 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 MYO9BQ13459 2157 aa11.92□□□□□ -0.5
SNF8-201ENST00000290330 UNC80Q8N2C7 3258 aa11.91□□□□□ -0.5
SNF8-201ENST00000290330 IGKV6D-21A0A0A0MT36 114 aa11.91□□□□□ -0.5
SNF8-201ENST00000290330 RRN3P2A6NIE6 340 aa11.91□□□□□ -0.5
SNF8-201ENST00000290330 DDX39AO00148 427 aaKnown RBP11.91□□□□□ -0.5
SNF8-201ENST00000290330 DHX15O43143 795 aaKnown RBP11.91□□□□□ -0.5
SNF8-201ENST00000290330 CCNE2O96020 404 aa11.91□□□□□ -0.5
SNF8-201ENST00000290330 AMHP03971 560 aa11.91□□□□□ -0.5
SNF8-201ENST00000290330 IGBP1P78318 339 aa11.91□□□□□ -0.5
SNF8-201ENST00000290330 PLCB4Q15147 1175 aa11.91□□□□□ -0.5
SNF8-201ENST00000290330 RASGRP4Q8TDF6 673 aa11.91□□□□□ -0.5
SNF8-201ENST00000290330 DNAJB3Q8WWF6 145 aa11.91□□□□□ -0.5
SNF8-201ENST00000290330 TNPO1Q92973 898 aaKnown RBP11.91□□□□□ -0.5
SNF8-201ENST00000290330 ZNF274Q96GC6 653 aaPredicted RBP11.91□□□□□ -0.5
SNF8-201ENST00000290330 UPF3BQ9BZI7 483 aaKnown RBP11.91□□□□□ -0.5
SNF8-201ENST00000290330 VPS54Q9P1Q0 977 aa11.91□□□□□ -0.5
SNF8-201ENST00000290330 PTPRSQ13332 1948 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.9□□□□□ -0.5
SNF8-201ENST00000290330 LINC01553A4QN01 128 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 IPO5O00410 1097 aaKnown RBP11.9□□□□□ -0.5
SNF8-201ENST00000290330 SLC26A2P50443 739 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 HTRA4P83105 476 aaPredicted RBP11.9□□□□□ -0.5
SNF8-201ENST00000290330 MGAT3Q09327 533 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 ABHD15Q6UXT9 468 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 RSPH3Q86UC2 560 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 MYOCDQ8IZQ8 938 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 CCDC148Q8NFR7 591 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 BICD2Q8TD16 824 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 APBB2Q92870 758 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 ZBTB10Q96DT7 871 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 LARP6Q9BRS8 491 aaKnown RBP11.9□□□□□ -0.5
SNF8-201ENST00000290330 IFIH1Q9BYX4 1025 aaKnown RBP11.9□□□□□ -0.5
SNF8-201ENST00000290330 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 INSL6Q9Y581 213 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 MTCH2Q9Y6C9 303 aa11.9□□□□□ -0.5
SNF8-201ENST00000290330 POTEB3A0JP26 581 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 GTPBP6O43824 516 aaPredicted RBP11.89□□□□□ -0.51
SNF8-201ENST00000290330 EDIL3O43854 480 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 LPXNO60711 386 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 GHRP10912 638 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 CIITAP33076 1130 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 ERVK-21P61565 698 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 SETQ01105 290 aaPredicted RBP11.89□□□□□ -0.51
SNF8-201ENST00000290330 GRB10Q13322 594 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 LPIN1Q14693 890 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 KRT40Q6A162 431 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 POTEBQ6S5H4 581 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 TRIM22Q8IYM9 498 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 MICALL1Q8N3F8 863 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 TRAPPC12Q8WVT3 735 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 ATXN2LQ8WWM7 1075 aaKnown RBP11.89□□□□□ -0.51
SNF8-201ENST00000290330 TOP1MTQ969P6 601 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 UIMC1Q96RL1 719 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 TGS1Q96RS0 853 aaKnown RBP11.89□□□□□ -0.51
SNF8-201ENST00000290330 ZNF577Q9BSK1 485 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 SH3GLB2Q9NR46 395 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 TBC1D22BQ9NU19 505 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 PDRG1Q9NUG6 133 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 PCDHA2Q9Y5H9 948 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 A0A0C4DFX4 3053 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 PRUNE2Q8WUY3 3088 aa11.89□□□□□ -0.51
SNF8-201ENST00000290330 CPLX1O14810 134 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 BACH1O14867 736 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 RPLP2P05387 115 aaKnown RBP11.88□□□□□ -0.51
SNF8-201ENST00000290330 NLRP5P59047 1200 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 MRPS6P82932 125 aaKnown RBP11.88□□□□□ -0.51
SNF8-201ENST00000290330 SSRP1Q08945 709 aaKnown RBP11.88□□□□□ -0.51
SNF8-201ENST00000290330 STK3Q13188 491 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms