RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 GCNT3O95395 438 aa21.29■■□□□ 1
BRAF-201ENST00000288602 R3HDM1Q15032 1099 aaKnown RBP21.29■■□□□ 1
BRAF-201ENST00000288602 BANK1Q8NDB2 785 aa21.29■■□□□ 1
BRAF-201ENST00000288602 EHMT1Q9H9B1 1298 aa21.29■■□□□ 1
BRAF-201ENST00000288602 PLAGL2Q9UPG8 496 aa21.29■■□□□ 1
BRAF-201ENST00000288602 ENC1O14682 589 aa21.29■■□□□ 1
BRAF-201ENST00000288602 ZNF263O14978 683 aa21.29■■□□□ 1
BRAF-201ENST00000288602 WDR46O15213 610 aaKnown RBP21.29■■□□□ 1
BRAF-201ENST00000288602 TBCAO75347 108 aaKnown RBP21.29■■□□□ 1
BRAF-201ENST00000288602 HOXA7P31268 230 aaPredicted RBP21.29■■□□□ 1
BRAF-201ENST00000288602 CYLC1P35663 651 aaPredicted RBP21.29■■□□□ 1
BRAF-201ENST00000288602 ZKSCAN4Q969J2 545 aaPredicted RBP21.29■■□□□ 1
BRAF-201ENST00000288602 CEP63Q96MT8 703 aa21.29■■□□□ 1
BRAF-201ENST00000288602 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.29■■□□□ 1
BRAF-201ENST00000288602 STK24Q9Y6E0 443 aa21.29■■□□□ 1
BRAF-201ENST00000288602 KIF20AO95235 890 aa21.28■■□□□ 1
BRAF-201ENST00000288602 HSD17B4P51659 736 aa21.28■■□□□ 1
BRAF-201ENST00000288602 KNOP1Q1ED39 458 aaKnown RBP21.28■■□□□ 1
BRAF-201ENST00000288602 FOXR2Q6PJQ5 311 aa21.28■■□□□ 1
BRAF-201ENST00000288602 KSR1Q8IVT5 923 aa21.28■■□□□ 1
BRAF-201ENST00000288602 TRIM59Q8IWR1 403 aa21.28■■□□□ 1
BRAF-201ENST00000288602 NEK11Q8NG66 645 aa21.28■■□□□ 1
BRAF-201ENST00000288602 WNK4Q96J92 1243 aa21.28■■□□□ 1
BRAF-201ENST00000288602 CCDC42Q96M95 316 aa21.28■■□□□ 1
BRAF-201ENST00000288602 PURBQ96QR8 312 aaKnown RBP21.28■■□□□ 1
BRAF-201ENST00000288602 MXRA8Q9BRK3 442 aa21.28■■□□□ 1
BRAF-201ENST00000288602 VCAM1P19320 739 aa21.28■■□□□ 1
BRAF-201ENST00000288602 SPP2Q13103 211 aa21.28■■□□□ 1
BRAF-201ENST00000288602 EPM2AIP1Q7L775 607 aaPredicted RBP21.28■■□□□ 1
BRAF-201ENST00000288602 CACNA2D4Q7Z3S7 1137 aa21.28■■□□□ 1
BRAF-201ENST00000288602 BAP1Q92560 729 aa21.28■■□□□ 1
BRAF-201ENST00000288602 NAPGQ99747 312 aaPredicted RBP21.28■■□□□ 1
BRAF-201ENST00000288602 KIAA1683Q9H0B3 1180 aa21.28■■□□□ 1
BRAF-201ENST00000288602 TUFT1Q9NNX1 390 aa21.28■■□□□ 1
BRAF-201ENST00000288602 CLIC2O15247 247 aa21.27■■□□□ 1
BRAF-201ENST00000288602 CTNND1O60716 968 aaKnown RBP21.27■■□□□ 1
BRAF-201ENST00000288602 NMT1P30419 496 aaKnown RBP21.27■■□□□ 1
BRAF-201ENST00000288602 KRT83P78385 493 aa21.27■■□□□ 1
BRAF-201ENST00000288602 ZC2HC1CQ53FD0 456 aaPredicted RBP21.27■■□□□ 1
BRAF-201ENST00000288602 JAKMIP2Q96AA8 810 aa21.27■■□□□ 1
BRAF-201ENST00000288602 HAUS4Q9H6D7 363 aa21.27■■□□□ 1
BRAF-201ENST00000288602 KCNH7Q9NS40 1196 aa21.27■■□□□ 1
BRAF-201ENST00000288602 EIF3CLB5ME19 914 aaKnown RBP21.27■□□□□ 0.99
BRAF-201ENST00000288602 CETN3O15182 167 aa21.27■□□□□ 0.99
BRAF-201ENST00000288602 RPS12P25398 132 aaKnown RBP21.27■□□□□ 0.99
BRAF-201ENST00000288602 TRMT1LQ7Z2T5 733 aaKnown RBP21.27■□□□□ 0.99
BRAF-201ENST00000288602 MYCT1Q8N699 235 aa21.27■□□□□ 0.99
BRAF-201ENST00000288602 EIF3CQ99613 913 aaKnown RBP21.27■□□□□ 0.99
BRAF-201ENST00000288602 LSM14BQ9BX40 385 aaKnown RBP21.27■□□□□ 0.99
BRAF-201ENST00000288602 RPAP3Q9H6T3 665 aaPredicted RBP21.27■□□□□ 0.99
BRAF-201ENST00000288602 ZNF446Q9NWS9 450 aa21.27■□□□□ 0.99
BRAF-201ENST00000288602 CDC23Q9UJX2 597 aa21.27■□□□□ 0.99
BRAF-201ENST00000288602 NOL4O94818 638 aa21.26■□□□□ 0.99
BRAF-201ENST00000288602 H2AFXP16104 143 aaPredicted RBP21.26■□□□□ 0.99
BRAF-201ENST00000288602 EIF4A3P38919 411 aaKnown RBP21.26■□□□□ 0.99
BRAF-201ENST00000288602 C1orf186Q6ZWK4 172 aa21.26■□□□□ 0.99
BRAF-201ENST00000288602 CCDC170Q8IYT3 715 aa21.26■□□□□ 0.99
BRAF-201ENST00000288602 LPAR1Q92633 364 aa21.26■□□□□ 0.99
BRAF-201ENST00000288602 TEKT3Q9BXF9 490 aa21.26■□□□□ 0.99
BRAF-201ENST00000288602 SLC38A10Q9HBR0 1119 aa21.26■□□□□ 0.99
BRAF-201ENST00000288602 HDAC6Q9UBN7 1215 aa21.26■□□□□ 0.99
BRAF-201ENST00000288602 RBBP6Q7Z6E9 1792 aaKnown RBP21.26■□□□□ 0.99
BRAF-201ENST00000288602 ZNF541Q9H0D2 1346 aa21.26■□□□□ 0.99
BRAF-201ENST00000288602 CLCN6P51797 869 aa21.26■□□□□ 0.99
BRAF-201ENST00000288602 EDRF1Q3B7T1 1238 aa21.26■□□□□ 0.99
BRAF-201ENST00000288602 LXNQ9BS40 222 aa21.26■□□□□ 0.99
BRAF-201ENST00000288602 MACROD2A1Z1Q3 448 aa21.25■□□□□ 0.99
BRAF-201ENST00000288602 FAM13AO94988 1023 aa21.25■□□□□ 0.99
BRAF-201ENST00000288602 IPO7O95373 1038 aaKnown RBP21.25■□□□□ 0.99
BRAF-201ENST00000288602 EIF2AK2P19525 551 aaKnown RBP21.25■□□□□ 0.99
BRAF-201ENST00000288602 CASP4P49662 377 aa21.25■□□□□ 0.99
BRAF-201ENST00000288602 SETQ01105 290 aaPredicted RBP21.25■□□□□ 0.99
BRAF-201ENST00000288602 KCNH2Q12809 1159 aa21.25■□□□□ 0.99
BRAF-201ENST00000288602 TAAR1Q96RJ0 339 aa21.25■□□□□ 0.99
BRAF-201ENST00000288602 TRAF3IP3Q9Y228 551 aa21.25■□□□□ 0.99
BRAF-201ENST00000288602 ASTN1O14525 1302 aa21.25■□□□□ 0.99
BRAF-201ENST00000288602 GNA14O95837 355 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 HNRNPH3P31942 346 aaKnown RBP21.24■□□□□ 0.99
BRAF-201ENST00000288602 MARSP56192 900 aaKnown RBP21.24■□□□□ 0.99
BRAF-201ENST00000288602 POLR2FP61218 127 aaKnown RBP21.24■□□□□ 0.99
BRAF-201ENST00000288602 MRPS9P82933 396 aaKnown RBP21.24■□□□□ 0.99
BRAF-201ENST00000288602 RSRC2Q7L4I2 434 aaKnown RBP21.24■□□□□ 0.99
BRAF-201ENST00000288602 MAEAQ7L5Y9 396 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 SH2D3AQ9BRG2 576 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 DEF6Q9H4E7 631 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 MYO1AQ9UBC5 1043 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 FZD9O00144 591 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 AKAP3O75969 853 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 ZSCAN20P17040 1043 aaPredicted RBP21.24■□□□□ 0.99
BRAF-201ENST00000288602 EPS15P42566 896 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 KIF11P52732 1056 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 RPS6P62753 249 aaKnown RBP21.24■□□□□ 0.99
BRAF-201ENST00000288602 CDK17Q00537 523 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 ANGEL2Q5VTE6 544 aaKnown RBP21.24■□□□□ 0.99
BRAF-201ENST00000288602 PDXDC1Q6P996 788 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 PPP4R3CPQ6ZMV5 832 aa21.24■□□□□ 0.99
BRAF-201ENST00000288602 ZC3H3Q8IXZ2 948 aaKnown RBP21.24■□□□□ 0.99
BRAF-201ENST00000288602 SYTL5Q8TDW5 730 aaPredicted RBP21.24■□□□□ 0.99
BRAF-201ENST00000288602 NLGN2Q8NFZ4 835 aa21.23■□□□□ 0.99
BRAF-201ENST00000288602 PPP1R9AQ9ULJ8 1098 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms