RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SAAL1Q96ER3 474 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 PNKPQ96T60 521 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 PPIP5K2O43314 1243 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 ADCY1Q08828 1119 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 TAF11Q15544 211 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 CDC37Q16543 378 aaPredicted RBP13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 DBN1Q16643 649 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 LRRC23Q53EV4 343 aaPredicted RBP13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 RIC8AQ9NPQ8 531 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 INTS9Q9NV88 658 aaKnown RBP13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 FHOD1Q9Y613 1164 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 PRKG1Q13976 671 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 SF3B3Q15393 1217 aaKnown RBP13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 CROCCP2Q86T23 111 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 PPM1KQ8N3J5 372 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 FAF1Q9UNN5 650 aaPredicted RBP13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 PNMA6FA0A0J9YX94 578 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 FOXP2O15409 715 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 ALAS1P13196 640 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 SH2D4BQ5SQS7 431 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 VGLL2Q8N8G2 317 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 RILPQ96NA2 401 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 CSRNP1Q96S65 589 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 ANO3Q9BYT9 981 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 EHD2Q9NZN4 543 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 H0YIN7 160 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 K7ENM7 598 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 H2AFXP16104 143 aaPredicted RBP13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 LARGE2Q8N3Y3 721 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 MS4A14Q96JA4 679 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 NUF2Q9BZD4 464 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 INTS13Q9NVM9 706 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 GCNT4Q9P109 453 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 CAPN11Q9UMQ6 739 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 TBC1D8O95759 1140 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 COASYQ13057 564 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 FBXO33Q7Z6M2 555 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
SLC6A1-201ENST00000287766 BRD2P25440 801 aaKnown RBP13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 FAM83BQ5T0W9 1011 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 AEBP2Q6ZN18 517 aaPredicted RBP13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 IQCDQ96DY2 449 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 SUDS3Q9H7L9 328 aaPredicted RBP13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 NWD1Q149M9 1564 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 PIK3C2AO00443 1686 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 MYMKA6NI61 221 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 WNT7AO00755 349 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 BBOX1O75936 387 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 AFPP02771 609 aaKnown RBP13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 RASA1P20936 1047 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 PMS1P54277 932 aaKnown RBP13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 CAPN12Q6ZSI9 719 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 ADGRF4Q8IZF3 695 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 RAB3IPQ96QF0 476 aaPredicted RBP13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 TESPA1A2RU30 521 aaPredicted RBP13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 GAS8O95995 478 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 ZNF18P17022 549 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 MESDQ14696 234 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 SEPT2Q15019 361 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 ALKBH5Q6P6C2 394 aaKnown RBP13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 SRLQ86TD4 932 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 SFR1Q86XK3 245 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 FAM186BQ8IYM0 893 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 LRRC1Q9BTT6 524 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 PLCB1Q9NQ66 1216 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 STXBP3O00186 592 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 DLATP10515 647 aaKnown RBP13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 USP14P54578 494 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 EPHB4P54760 987 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 LRRC63Q05C16 580 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 PPP1R21Q6ZMI0 780 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 MIGA2Q7L4E1 593 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 MIER3Q7Z3K6 550 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 SMC1BQ8NDV3 1235 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 NEDD1Q8NHV4 660 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 RAD54LQ92698 747 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 PTPN22Q9Y2R2 807 aa13.63□□□□□ -0.23
SLC6A1-201ENST00000287766 ARHGAP23Q9P227 1491 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 APBA3O96018 575 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 DLGAP5Q15398 846 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 SCYL3Q8IZE3 742 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 FBXL16Q8N461 479 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 FNBP1Q96RU3 617 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 OSBPL9Q96SU4 736 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 CCSER1Q9C0I3 900 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 CXorf56Q9H5V9 222 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 MST1RQ04912 1400 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 SUN1O94901 812 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 UBL4BQ8N7F7 174 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 RAB17Q9H0T7 212 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 ATP8A1Q9Y2Q0 1164 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 SERPING1P05155 500 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 KCNH2Q12809 1159 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 FAM102BQ5T8I3 360 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 SPDL1Q96EA4 605 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 TSC22D3Q99576 134 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 LACRTQ9GZZ8 138 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 GOLPH3Q9H4A6 298 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms