RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 SEC16BQ96JE7 1060 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 FAM217BQ9NTX9 383 aaPredicted RBP17.03■□□□□ 0.32
USP43-201ENST00000285199 RFX7Q2KHR2 1363 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 CEMIPQ8WUJ3 1361 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 PASKQ96RG2 1323 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 SALL1Q9NSC2 1324 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 POTEFA5A3E0 1075 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 GOLGA8IPA6NC78 632 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 GOLGA8JA6NMD2 632 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 POTEIP0CG38 1075 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 CUL1Q13616 776 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 POTEGQ6S5H5 508 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 POTEEQ6S8J3 1075 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 CNBD1Q8NA66 436 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 LRRC8CQ8TDW0 803 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 CELF1Q92879 486 aaKnown RBP17.03■□□□□ 0.32
USP43-201ENST00000285199 USP40Q9NVE5 1235 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 ITIH6Q6UXX5 1313 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 ATF2P15336 505 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 SCP2P22307 547 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 ALX1Q15699 326 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 PTGISQ16647 500 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 NBPF9Q3BBW0 867 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 PDXDC1Q6P996 788 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 GLG1Q92896 1179 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 GBP5Q96PP8 586 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 PRMT1Q99873 361 aaKnown RBP17.03■□□□□ 0.32
USP43-201ENST00000285199 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 EHMT1Q9H9B1 1298 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 ETNK1Q9HBU6 452 aa17.03■□□□□ 0.32
USP43-201ENST00000285199 MYMKA6NI61 221 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 K7ENM7 598 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 SLC9A1P19634 815 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 COASYQ13057 564 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 CDKAL1Q5VV42 579 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 SEPT14Q6ZU15 432 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 SH2D3AQ9BRG2 576 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 IMPG2Q9BZV3 1241 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 MYOM1P52179 1685 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 UTYO14607 1347 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 EVI5O60447 810 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 TRIM49P0CI25 452 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 TRIM49CP0CI26 452 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 HAUS1Q96CS2 278 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 NOP53Q9NZM5 478 aaKnown RBP17.02■□□□□ 0.32
USP43-201ENST00000285199 CEP72Q9P209 647 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 PARP2Q9UGN5 583 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 RABGAP1Q9Y3P9 1069 aa17.02■□□□□ 0.32
USP43-201ENST00000285199 A0A087X0T9 212 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 LOC102724428A0A0B4J2F2 783 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 LAD1O00515 517 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 SYF2O95926 243 aaKnown RBP17.02■□□□□ 0.31
USP43-201ENST00000285199 FAM228BP0C875 321 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 TNNI1P19237 187 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 MSH2P43246 934 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 SIK1P57059 783 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 CTTNQ14247 550 aaKnown RBP17.02■□□□□ 0.31
USP43-201ENST00000285199 DOK7Q18PE1 504 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 SFR1Q86XK3 245 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 CASKIN2Q8WXE0 1202 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 KIFAP3Q92845 792 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 CYTH2Q99418 400 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 VCXQ9H320 206 aa17.02■□□□□ 0.31
USP43-201ENST00000285199 TTC7AQ9ULT0 858 aaPredicted RBP17.02■□□□□ 0.31
USP43-201ENST00000285199 RCCD1A6NED2 376 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 TOM1O60784 492 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 OPHN1O60890 802 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 KCNJ1P48048 391 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 BIRC2Q13490 618 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 GALNT17Q6IS24 598 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 ARHGAP20Q9P2F6 1191 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 STK17AQ9UEE5 414 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 DCTN4Q9UJW0 460 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 CD19P15391 556 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 CHN1P15882 459 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 EAPPQ56P03 285 aaPredicted RBP17.01■□□□□ 0.31
USP43-201ENST00000285199 HOOK2Q96ED9 719 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 PITPNM3Q9BZ71 974 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 DEPDC5O75140 1603 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.01■□□□□ 0.31
USP43-201ENST00000285199 CA4P22748 312 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 RASSF2P50749 326 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 RBM26Q5T8P6 1007 aaKnown RBP17.01■□□□□ 0.31
USP43-201ENST00000285199 TMEM139Q8IV31 216 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 HIPK4Q8NE63 616 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 MTMR8Q96EF0 704 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 GGA1Q9UJY5 639 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 PCDHA6Q9UN73 950 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 PCDHA8Q9Y5H6 950 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 KDM3AQ9Y4C1 1321 aa17.01■□□□□ 0.31
USP43-201ENST00000285199 CIB2O75838 187 aa17■□□□□ 0.31
USP43-201ENST00000285199 FERP16591 822 aa17■□□□□ 0.31
USP43-201ENST00000285199 PMS2P54278 862 aa17■□□□□ 0.31
USP43-201ENST00000285199 WDR44Q5JSH3 913 aa17■□□□□ 0.31
USP43-201ENST00000285199 USP37Q86T82 979 aa17■□□□□ 0.31
USP43-201ENST00000285199 KIAA0825Q8IV33 1275 aa17■□□□□ 0.31
USP43-201ENST00000285199 FAM118BQ9BPY3 351 aa17■□□□□ 0.31
USP43-201ENST00000285199 MAGEF1Q9HAY2 307 aa17■□□□□ 0.31
USP43-201ENST00000285199 METTL14Q9HCE5 456 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms