RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 USP17L4A6NCW7 530 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 STXBP3O00186 592 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 DUX4L2P0CJ85 424 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 DUX4L3P0CJ86 424 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 DUX4L4P0CJ87 422 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 DUX4L5P0CJ88 424 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 DUX4L6P0CJ89 424 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 DUX4L7P0CJ90 424 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 CCT5P48643 541 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 FBXW4P57775 412 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 MECOMQ03112 1051 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 YWHAHQ04917 246 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 PTGDRQ13258 359 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 MTX1Q13505 466 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 C16orf72Q14CZ0 275 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 MORF4L2Q15014 288 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 FAM47AQ5JRC9 791 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 USP17L1Q7RTZ2 530 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 RDH13Q8NBN7 331 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 GPKOWQ92917 476 aaPredicted RBP eCLIP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SRPK1Q96SB4 655 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 KDM4CQ9H3R0 1056 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SELENONQ9NZV5 590 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 DUX4Q9UBX2 424 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 LSM7Q9UK45 103 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SYNGAP1Q96PV0 1343 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 ASB14A6NK59 587 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SNX2O60749 519 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 MT-ND3P03897 115 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 CYP4A11Q02928 519 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 KAZNQ674X7 775 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 DARS2Q6PI48 645 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 ANGPTL8Q6UXH0 198 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 PI4K2BQ8TCG2 481 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 TEKT4Q8WW24 435 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 NCLNQ969V3 563 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SH3KBP1Q96B97 665 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 NEUROG2Q9H2A3 272 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 KDM5AP29375 1690 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 GOLGA8SH3BPF8 625 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 AP3B1O00203 1094 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 STK25O00506 426 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 STAT3P40763 770 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 RAP1GDS1P52306 607 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 ARL4CP56559 192 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 CAV1Q03135 178 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 USPL1Q5W0Q7 1092 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 KRT80Q6KB66 452 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 CENPUQ71F23 418 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 DGKHQ86XP1 1220 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 CHCHD3Q9NX63 227 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 COPG1Q9Y678 874 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 NPHP4O75161 1426 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 POTEB3A0JP26 581 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 GOLGA8IPA6NC78 632 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 KPNA7A9QM74 516 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 IKBKBO14920 756 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 HSPD1P10809 573 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SMARCA1P28370 1054 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 TECP42680 631 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 VPS41P49754 854 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 POTEBQ6S5H4 581 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 DSTYKQ6XUX3 929 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 TSPYL6Q8N831 410 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 MB21D1Q8N884 522 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 TMEM35BQ8NCS4 154 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 CCDC197Q8NCU1 140 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 RABGGTAQ92696 567 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 ASIC4Q96FT7 647 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 MASTLQ96GX5 879 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 EPAS1Q99814 870 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 TUBGCP2Q9BSJ2 902 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 FAM129AQ9BZQ8 928 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 FAM49AQ9H0Q0 323 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 BLZF1Q9H2G9 400 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 POLIQ9UNA4 740 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 PNMA6FA0A0J9YX94 578 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 CCDC78A2IDD5 438 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ZBBXA8MT70 800 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 A1BGP04217 495 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SLFN14P0C7P3 912 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ZNF18P17022 549 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 POLR2FP61218 127 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 BASP1P80723 227 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SCYL3Q8IZE3 742 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 BEST2Q8NFU1 509 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ULK4Q96C45 1275 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 TSSK1BQ9BXA7 367 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SCHIP1Q9P0W5 487 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 NLRP1Q9C000 1473 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 AATKQ6ZMQ8 1374 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SYNMO15061 1565 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 HNRNPRO43390 633 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 OPHN1O60890 802 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ESRRBO95718 433 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 LIFRP42702 1097 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 EFNA5P52803 228 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 EHHADHQ08426 723 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SEMA3FQ13275 785 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SNX1Q13596 522 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms