RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 RMDN3Q96TC7 470 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 DNAJC7Q99615 494 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 PDCD2LQ9BRP1 358 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 DESI2Q9BSY9 194 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 TTYH3Q9C0H2 523 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 POLD4Q9HCU8 107 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 RNF146Q9NTX7 359 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 WRAP73Q9P2S5 460 aaPredicted RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 ATP2A1O14983 1001 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 GNA14O95837 355 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 MYCLP12524 364 aaPredicted RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 CASP5P51878 434 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 ITGB3BPQ13352 177 aaPredicted RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 KNOP1Q1ED39 458 aaKnown RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 TSR1Q2NL82 804 aaKnown RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 EDRF1Q3B7T1 1238 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 PPP4R3CPQ6ZMV5 832 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 MIER3Q7Z3K6 550 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 IQCDQ96DY2 449 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 PCMTD1Q96MG8 357 aaPredicted RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 PURBQ96QR8 312 aaKnown RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 CHP1Q99653 195 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 BCAS3Q9H6U6 928 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 PXMP2Q9NR77 195 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 TBC1D22BQ9NU19 505 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 HOXC10Q9NYD6 342 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 RNF181Q9P0P0 153 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 ZNF214Q9UL59 606 aaPredicted RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 SIK3Q9Y2K2 1263 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 SBF1O95248 1867 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 A0A1W2PQJ5 194 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 SFI1A8K8P3 1242 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 DDX39AO00148 427 aaKnown RBP10.6□□□□□ -0.71
TRIM55-201ENST00000276573 CTIFO43310 598 aaKnown RBP10.6□□□□□ -0.71
TRIM55-201ENST00000276573 TBCAO75347 108 aaKnown RBP10.6□□□□□ -0.71
TRIM55-201ENST00000276573 PRPF6O94906 941 aaKnown RBP10.6□□□□□ -0.71
TRIM55-201ENST00000276573 P4HBP07237 508 aaKnown RBP10.6□□□□□ -0.71
TRIM55-201ENST00000276573 HOXD13P35453 343 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 MARSP56192 900 aaKnown RBP10.6□□□□□ -0.71
TRIM55-201ENST00000276573 ZBED6P86452 979 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 ADAM9Q13443 819 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 MTMR1Q13613 665 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 TMEM132BQ14DG7 1078 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 BMT2Q1RMZ1 405 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 CCDC40Q4G0X9 1142 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 ARHGEF16Q5VV41 709 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 SNRNP48Q6IEG0 339 aaKnown RBP10.6□□□□□ -0.71
TRIM55-201ENST00000276573 XRRA1Q6P2D8 792 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 WDR59Q6PJI9 974 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 DLK2Q6UY11 383 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 BANK1Q8NDB2 785 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 DCPSQ96C86 337 aaKnown RBP10.6□□□□□ -0.71
TRIM55-201ENST00000276573 OLFML3Q9NRN5 406 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 AGPAT5Q9NUQ2 364 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 KCND2Q9NZV8 630 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 PKD2L1Q9P0L9 805 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 DNAI1Q9UI46 699 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 TRAF3IP3Q9Y228 551 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 PHIPQ8WWQ0 1821 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 PHLPP2Q6ZVD8 1323 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 RLFQ13129 1914 aa10.6□□□□□ -0.71
TRIM55-201ENST00000276573 POLR2AP24928 1970 aaKnown RBP10.59□□□□□ -0.71
TRIM55-201ENST00000276573 PDXKO00764 312 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 CETN3O15182 167 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 FAM13AO94988 1023 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 MYBP10242 640 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 TRIM21P19474 475 aaKnown RBP10.59□□□□□ -0.71
TRIM55-201ENST00000276573 VSIG10LQ86VR7 867 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 RBM46Q8TBY0 533 aaKnown RBP10.59□□□□□ -0.71
TRIM55-201ENST00000276573 TSC1Q92574 1164 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 LXNQ9BS40 222 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 SYT17Q9BSW7 474 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 ZSWIM4Q9H7M6 989 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 MRPL44Q9H9J2 332 aaKnown RBP10.59□□□□□ -0.71
TRIM55-201ENST00000276573 SNCAIPQ9Y6H5 919 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 EPN1Q9Y6I3 576 aaPredicted RBP10.59□□□□□ -0.71
TRIM55-201ENST00000276573 MYPNQ86TC9 1320 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 PARP14Q460N5 1801 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 ATP9AO75110 1047 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 ZNF131P52739 623 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 VGLL4Q14135 290 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 MEA1Q16626 185 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 TRIM59Q8IWR1 403 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 MYCT1Q8N699 235 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 ZNF397Q8NF99 534 aaPredicted RBP10.59□□□□□ -0.71
TRIM55-201ENST00000276573 MAF1Q9H063 256 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 SEL1LQ9UBV2 794 aa10.59□□□□□ -0.71
TRIM55-201ENST00000276573 ARHGEF35A5YM69 484 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 CALUO43852 315 aaPredicted RBP10.58□□□□□ -0.72
TRIM55-201ENST00000276573 LYPLA2O95372 231 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 GCNT3O95395 438 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 NR3C2P08235 984 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 ERCC3P19447 782 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 GUCY2CP25092 1073 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 CCND2P30279 289 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 GNG11P61952 73 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 KCNMA1Q12791 1236 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 SULF1Q8IWU6 871 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 ACRBPQ8NEB7 543 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms