RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 KLHL29Q96CT2 875 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 RMI1Q9H9A7 625 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 NARFQ9UHQ1 456 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 FBXL5Q9UKA1 691 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 SRPRBQ9Y5M8 271 aaKnown RBP17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 WDR19Q8NEZ3 1342 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 LGALS16A8MUM7 142 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 CHN1P15882 459 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 TRIM21P19474 475 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 DYNLL1P63167 89 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 ALX1Q15699 326 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 DIS3L2Q8IYB7 885 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 KIFAP3Q92845 792 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 SLX1AQ9BQ83 275 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 TFCP2L1Q9NZI6 479 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 PACSIN2Q9UNF0 486 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 CYP2D7A0A087X1C5 515 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 FAM205CA6NFA0 338 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 MMEP08473 750 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 GNAZP19086 355 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 MRPS35P82673 323 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 EVX2Q03828 476 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 CCDC178Q5BJE1 867 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 ACBD5Q5T8D3 534 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 KLHDC7AQ5VTJ3 777 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 OR52E8Q6IFG1 317 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 TYW1BQ6NUM6 668 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 SYMPKQ92797 1274 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 ARHGEF1Q92888 912 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 IFT43Q96FT9 208 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 GSDMAQ96QA5 445 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 FAM217BQ9NTX9 383 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 RWDD2AQ9UIY3 292 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 PCDHA13Q9Y5I0 950 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 SCN7AQ01118 1682 aa17.16■□□□□ 0.34
CTDSP1-201ENST00000273062 RPS6KA4O75676 772 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 ITIH4Q14624 930 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 KRT71Q3SY84 523 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 CFAP221Q4G0U5 840 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 PABPC1LQ4VXU2 614 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 AKNAD1Q5T1N1 836 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 GALNT8Q9NY28 637 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 LRRC42Q9Y546 428 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 XDHP47989 1333 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 A0A1B0GUL6 1792 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 TRIM29Q14134 588 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 NTRK3Q16288 839 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 CMTR1Q8N1G2 835 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 OXER1Q8TDS5 423 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 MAF1Q9H063 256 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 LNPEPQ9UIQ6 1025 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 PHF24Q9UPV7 400 aa17.15■□□□□ 0.34
CTDSP1-201ENST00000273062 VIMP08670 466 aaKnown RBP17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 INHBCP55103 352 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 SPAG1Q07617 926 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 SPA17Q15506 151 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 MFSD6Q6ZSS7 791 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 ATXN2LQ8WWM7 1075 aaKnown RBP17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 BICD1Q96G01 975 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 CCDC42Q96M95 316 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 PSMD1Q99460 953 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 MTRQ99707 1265 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 SLC26A6Q9BXS9 759 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 MINDY4BA8MYZ0 360 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 ZBTB43O43298 467 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 CREB3O43889 395 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 PLS1Q14651 629 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 SGSM1Q2NKQ1 1148 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 MIGA2Q7L4E1 593 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 SWAP70Q9UH65 585 aa17.14■□□□□ 0.33
CTDSP1-201ENST00000273062 PNPLA7Q6ZV29 1317 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 STK36Q9NRP7 1315 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 GOLGA8AA7E2F4 631 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 WNT7AO00755 349 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 SART1O43290 800 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 ALDH1B1P30837 517 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 LBRQ14739 615 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 DBN1Q16643 649 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 RUFY4Q6ZNE9 571 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 TXNRD3Q86VQ6 643 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 ZNF579Q8NAF0 562 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 NDNQ99608 321 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 ZWILCHQ9H900 591 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 ARHGEF3Q9NR81 526 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 ZNHIT6Q9NWK9 470 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 ARHGAP20Q9P2F6 1191 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 ASAP2O43150 1006 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 FTCDO95954 541 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 ATP6V1C1P21283 382 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 IARSP41252 1262 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 IFNAR2P48551 515 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 RAD23BP54727 409 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 RASSF7Q02833 373 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 UBE4AQ14139 1066 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 SLC10A5Q5PT55 438 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 AGBL2Q5U5Z8 902 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 GALNT17Q6IS24 598 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 LMNTD2Q8IXW0 634 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms